RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 LY9Q9HBG7 655 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 PCDH9Q9HC56 1237 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 DNAJC4Q9NNZ3 241 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 NRBP2Q9NSY0 501 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 ANKRD10Q9NXR5 420 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 WWOXQ9NZC7 414 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 PKD2L2Q9NZM6 624 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 PDP1Q9P0J1 537 aaPredicted RBP3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 COPS7AQ9UBW8 275 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 OR14J1Q9UGF5 321 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 PACSIN2Q9UNF0 486 aaPredicted RBP3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 B9D1Q9UPM9 204 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 CA5BQ9Y2D0 317 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 GRIP1Q9Y3R0 1128 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 OR10H1Q9Y4A9 318 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 ATP6V1DQ9Y5K8 247 aa3.55□□□□□ -1.84
AC055720.1-201ENST00000539552 PIK3C2GO75747 1445 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 RAB3GAP2Q9H2M9 1393 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TRAV26-1A0A087WT03 109 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 A0A087WUV0 522 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TMEM202A6NGA9 273 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PPIAL4DF5H284 164 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF197O14709 1029 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 KLF11O14901 512 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ARPC3O15145 178 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MDM4O15151 490 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 RNMTO43148 476 aaKnown RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 OR10H2O60403 315 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 BCAS1O75363 584 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TMCC1O94876 653 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CDK14O94921 469 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CLPTM1O96005 669 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 LYNP07948 512 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SFTPBP07988 381 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PLEKP08567 350 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SERPINF2P08697 491 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF24P17028 368 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 FPR3P25089 353 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TACR3P29371 465 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 HOXA6P31267 233 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 RRM2P31350 389 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TRIM23P36406 574 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MAGEA11P43364 429 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TNFRSF4P43489 277 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 GPR4P46093 362 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CSNK1EP49674 416 aaKnown RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CCT8P50990 548 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 RAB9AP51151 201 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF84P51523 738 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MAPK12P53778 367 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 RIPPLY3P57055 190 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CSNK2A1P68400 391 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 GSTO1P78417 241 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PSG6Q00889 435 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SLAQ13239 276 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 USF2Q15853 346 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PTGISQ16647 500 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MEP1AQ16819 746 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 HKDC1Q2TB90 917 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 LACTB2Q53H82 288 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF311Q5JNZ3 666 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CTSL3PQ5NE16 218 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ABHD17BQ5VST6 288 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MLIPQ5VWP3 458 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 RAET1LQ5VY80 246 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PLCXD3Q63HM9 321 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC39A4Q6P5W5 647 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 NAPRTQ6XQN6 538 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SIGLEC15Q6ZMC9 328 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF517Q6ZMY9 492 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 COLCA1Q6ZS62 124 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CDHR3Q6ZTQ4 885 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 USP50Q70EL3 339 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 LUZP2Q86TE4 346 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF683Q8IZ20 524 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 GPC2Q8N158 579 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 LRRC17Q8N6Y2 441 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TMEM217Q8N7C4 229 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ASCC1Q8N9N2 400 aaKnown RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 TERB1Q8NA31 727 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 CSNK2A3Q8NEV1 391 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 OR4C5Q8NGB2 326 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 OR5D13Q8NGL4 314 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 OR2AJ1Q8NGZ0 328 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 VANGL1Q8TAA9 524 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 KCNG3Q8TAE7 436 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 FAM81AQ8TBF8 368 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 GPX8Q8TED1 209 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ATOH1Q92858 354 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MCHR2Q969V1 340 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 PINX1Q96BK5 328 aaKnown RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 MYEOVQ96EZ4 313 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 STAMBPL1Q96FJ0 436 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ZFYVE19Q96K21 471 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 INPP4AQ96PE3 977 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 VPS35Q96QK1 796 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ACBD6Q9BR61 282 aa3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 ROPN1BQ9BZX4 212 aaPredicted RBP3.54□□□□□ -1.84
AC055720.1-201ENST00000539552 SLC39A8Q9C0K1 460 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms