RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FBXO8Q9NRD0 319 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 ADAM29Q9UKF5 820 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 PCDHGA2Q9Y5H1 932 aa16.16■□□□□ 0.18
PCDHB17P-201ENST00000539533 C1orf226A1L170 272 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 EVPLLA8MZ36 301 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 GPR37L1O60883 481 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 IGFBP5P24593 272 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 FMO3P31513 532 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 FNTBP49356 437 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 RPS15AP62244 130 aaKnown RBP16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 LSM3P62310 102 aaKnown RBP16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 DNASE1L3Q13609 305 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 INAQ16352 499 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 B3GNT8Q7Z7M8 397 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 GKN2Q86XP6 184 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 ARL14Q8N4G2 192 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 OR2L5Q8NG80 312 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 YIPF6Q96EC8 236 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 OR2A5Q96R48 311 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 DUSP15Q9H1R2 295 aaPredicted RBP16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 VNN3Q9NY84 501 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 POU2F3Q9UKI9 436 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 PCDHGA10Q9Y5H3 936 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 ENTPD2Q9Y5L3 495 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 FAM221BA6H8Z2 402 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 WASHC1A8K0Z3 465 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 BCAT2O15382 392 aaPredicted RBP16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 BMP4P12644 408 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 IL1RNP18510 177 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 TGM1P22735 817 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 SERPINB10P48595 397 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 VBP1P61758 197 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 ABHD18Q0P651 414 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 HEPACAMQ14CZ8 416 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 NPTX1Q15818 432 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 DEFB133Q30KQ1 61 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 P2RY8Q86VZ1 359 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 SETD9Q8NE22 299 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 PYURFQ96I23 114 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 REXO5Q96IC2 774 aaKnown RBP16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 NECAB3Q96P71 396 aaPredicted RBP16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 SIAEQ9HAT2 523 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 UCKL1Q9NWZ5 548 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 PMF1-BGLAPU3KQ54 211 aa16.15■□□□□ 0.18
PCDHB17P-201ENST00000539533 THADAQ6YHU6 1953 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR5K3A6NET4 321 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 SH3BP5O60239 455 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 NTRK1P04629 796 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 HIST1H1TP22492 207 aaPredicted RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLAMF1Q13291 335 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 SHQ1Q6PI26 577 aaKnown RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ADCK1Q86TW2 530 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ASPGQ86U10 573 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 CYP4Z1Q86W10 505 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ACOT4Q8N9L9 421 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR6Q1Q8NGQ2 317 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR10Q1Q8NGQ4 319 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 KCNC2Q96PR1 638 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ALOXE3Q9BYJ1 711 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 DUSP21Q9H596 190 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 VPS4AQ9UN37 437 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 WBP11Q9Y2W2 641 aaKnown RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 TPRKBQ9Y3C4 175 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 LOC105369274A0A096LPK9 316 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 LOC102723532A0A0G2JNH3 316 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 A0A1W2PRB8 838 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 PRKRAO75569 313 aaKnown RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 HOXB6P17509 224 aaKnown RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 GPX2P18283 190 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ATP5A1P25705 553 aaKnown RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 CERS1P27544 350 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 HNRNPKP61978 463 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC35A2P78381 396 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 INAVAQ3KP66 663 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 CPZQ66K79 652 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 FRMPD2BQ6IN97 320 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZCCHC8Q6NZY4 707 aaKnown RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 TRIM40Q6P9F5 258 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 GPR155Q7Z3F1 870 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 OOSP2Q86WS3 158 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR4N4Q8N0Y3 316 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 GOT1L1Q8NHS2 421 aaPredicted RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 DYNC2LI1Q8TCX1 351 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZNF300Q96RE9 604 aaPredicted RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 CTRCQ99895 268 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 DPH2Q9BQC3 489 aaPredicted RBP16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 RIBC2Q9H4K1 309 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLAMF7Q9NQ25 335 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 AASSQ9UDR5 926 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 PILRAQ9UKJ1 303 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 A0A0C4DFX4 3053 aa16.14■□□□□ 0.17
PCDHB17P-201ENST00000539533 P2RX6O15547 441 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 CYP4B1P13584 511 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 AFF3P51826 1226 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 CASP9P55211 416 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 TPTEP56180 551 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SRSF5Q13243 272 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC9A5Q14940 896 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SF3B4Q15427 424 aaKnown RBP eCLIP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms