RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TRA2BP62995 288 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 MAT1AQ00266 395 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 KCNAB1Q14722 419 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 EXOC3L2Q2M3D2 409 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 TRMT12Q53H54 448 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 LAIR2Q6ISS4 152 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 NMD3Q96D46 503 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 TGM7Q96PF1 710 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 CCDC3Q9BQI4 270 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 TP53BP1Q12888 1972 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 H3BSA7 217 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 FFAR1O14842 300 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 FESP07332 822 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 SMIM10L1P0DMW3 83 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 PTNP21246 168 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 CLCN2P51788 898 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 RACK1P63244 317 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 CD47Q08722 323 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 MYBPC3Q14896 1274 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 SUZ12Q15022 739 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 CRB2Q5IJ48 1285 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 TSPYL5Q86VY4 417 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 HIPK1Q86Z02 1210 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 SRFBP1Q8NEF9 429 aaKnown RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 ELP4Q96EB1 424 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 SMIM10Q96HG1 83 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 ZNF300Q96RE9 604 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-205ENST00000538545 PHOX2BQ99453 314 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 FEVQ99581 238 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 NIPSNAP1Q9BPW8 284 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 KIF17Q9P2E2 1029 aa13.29□□□□□ -0.28
ACTN1-205ENST00000538545 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 XPNPEP2O43895 674 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 FGF17O60258 216 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 MFN2O95140 757 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 FPR1P21462 350 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 EEF1B2P24534 225 aaKnown RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 CLK3P49761 638 aaKnown RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 RBBP4Q09028 425 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SMN1Q16637 294 aaKnown RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 PRAMEF17Q5VTA0 474 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 ARMC6Q6NXE6 501 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 DEF8Q6ZN54 512 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 MEX3DQ86XN8 651 aaKnown RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SLC5A8Q8N695 610 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SLC16A11Q8NCK7 471 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 NUP43Q8NFH3 380 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 ZFP28Q8NHY6 868 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 C1orf216Q8TAB5 229 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 NT5CQ8TCD5 201 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SLC38A3Q99624 504 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 CHRDQ9H2X0 955 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 RASSF1Q9NS23 344 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 EHD3Q9NZN3 535 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 ZNF780BQ9Y6R6 833 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 A0A1B0GVT2 93 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 CLDN24A6NM45 220 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 K7ESF4 209 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 MAPK10P53779 464 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 HOXC5Q00444 222 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 TNFRSF17Q02223 184 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SNAP47Q5SQN1 464 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 CCNJQ5T5M9 372 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 CAMKVQ8NCB2 501 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 NCSTNQ92542 709 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 TWSG1Q9GZX9 223 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 HCN3Q9P1Z3 774 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 IFT80Q9P2H3 777 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-205ENST00000538545 POMT2Q9UKY4 750 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SLC6A14Q9UN76 642 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 CLCA2Q9UQC9 943 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 PADI2Q9Y2J8 665 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 SIT1Q9Y3P8 196 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 PCDHGA2Q9Y5H1 932 aa13.28□□□□□ -0.28
ACTN1-205ENST00000538545 AQP9O43315 295 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 B3GALT2O43825 422 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 FCMRO60667 390 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 CXCL12P48061 93 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 SEPHS1P49903 392 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 ELOCQ15369 112 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 CNPY1Q3B7I2 92 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 AMZ1Q400G9 498 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 KDM4DQ6B0I6 523 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 DGAT2L6Q6ZPD8 337 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 AMER2Q8N7J2 671 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 PSMA8Q8TAA3 256 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 LZICQ8WZA0 190 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 SLC9A6Q92581 669 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 GTPBP3Q969Y2 492 aaKnown RBP13.27□□□□□ -0.28
ACTN1-205ENST00000538545 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.28
ACTN1-205ENST00000538545 USE1Q9NZ43 259 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 SEC14L3Q9UDX4 400 aa13.27□□□□□ -0.28
ACTN1-205ENST00000538545 C3orf18Q9UK00 162 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms