RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CUZD1Q86UP6 607 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ZFAND4Q86XD8 727 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 VRK3Q8IV63 474 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 MISPQ8IVT2 679 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CEP97Q8IW35 865 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CPSF7Q8N684 471 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 BMPERQ8N8U9 685 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF527Q8NB42 609 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PCYOX1LQ8NBM8 494 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 OR6Y1Q8NGX8 325 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 OR6S1Q8NH40 331 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 OR1L3Q8NH93 324 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 POC1BQ8TC44 478 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SFXN5Q8TD22 340 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TCP10LQ8TDR4 215 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PATE1Q8WXA2 126 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PPCDCQ96CD2 204 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TLCD1Q96CP7 247 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PHF21BQ96EK2 531 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 REXO5Q96IC2 774 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SGCZQ96LD1 299 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CEP19Q96LK0 163 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 IL17FQ96PD4 163 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GBP5Q96PP8 586 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SPATA5L1Q9BVQ7 753 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ACPTQ9BZG2 426 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 DPY30Q9C005 99 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 DDX31Q9H8H2 851 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GORASP2Q9H8Y8 452 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CAB39LQ9H9S4 337 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 RPRD1BQ9NQG5 326 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FSCN3Q9NQT6 498 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ACSS1Q9NUB1 689 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TCFL5Q9UL49 500 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PCDHGB6Q9Y5F9 930 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FAM186AA6NE01 2351 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 MUC6Q6W4X9 2439 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PRAMEF33A0A0G2JMD5 474 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM120BA0PK00 339 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 VSTM5A8MXK1 200 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TCP11X1B4DZS4 312 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SHOXO15266 292 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 DLX3O60479 287 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PRAMEF10O60809 474 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PRAMEF2O60811 474 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 DNAJA2O60884 412 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SEC22BO75396 215 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GPR75O95800 540 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 BAG2O95816 211 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FAM153BP0C7A2 387 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PRSS56P0CW18 603 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ETS2P15036 469 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SLC1A6P48664 564 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 EIF2B2P49770 351 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GDI2P50395 445 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 NAGLUP54802 743 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 P2RX3P56373 397 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 BTN3A2P78410 334 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TNFRSF17Q02223 184 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SLC13A2Q13183 592 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 DDX39BQ13838 428 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 COTL1Q14019 142 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 OR4D1Q15615 310 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GPR19Q15760 415 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CHI3L2Q15782 390 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 NPTX1Q15818 432 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CPSF6Q16630 551 aaKnown RBP eCLIP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FAM153CQ494X1 144 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FBXO48Q5FWF7 155 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 AGAP7PQ5VUJ5 663 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 SEZ6L2Q6UXD5 910 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 RHOUQ7L0Q8 258 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TRIM46Q7Z4K8 759 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 LRRC56Q8IYG6 542 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ARHGAP24Q8N264 748 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 C17orf47Q8NEP4 570 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 OR51Q1Q8NH59 317 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ANGPTL6Q8NI99 470 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ENKURQ8TC29 256 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CT55Q8WUE5 264 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 GATA6Q92908 595 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 NKD1Q969G9 470 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 NEIL2Q969S2 332 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TP53INP1Q96A56 240 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 EFHD2Q96C19 240 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 HSPBAP1Q96EW2 488 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 AGAP4Q96P64 663 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 ASCL3Q9NQ33 180 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 POLE3Q9NRF9 147 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 HPF1Q9NWY4 346 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 FAM120CQ9NX05 1096 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TOR4AQ9NXH8 423 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 PTGFRNQ9P2B2 879 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 REV1Q9UBZ9 1251 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 TSR3Q9UJK0 312 aaKnown RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 HAO1Q9UJM8 370 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 KLF13Q9Y2Y9 288 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CBY1Q9Y3M2 126 aa3.37□□□□□ -1.87
PTPN22-211ENST00000538253 CHTOPQ9Y3Y2 248 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms