RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 OGFOD2Q6N063 350 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 TCTN3Q6NUS6 607 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 LYPD8Q6UX82 237 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 PTRH1Q86Y79 214 aaKnown RBP12.16□□□□□ -0.46
CHFR-216ENST00000538235 CCDC116Q8IYX3 515 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 ARMC10Q8N2F6 343 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 TMEM132CQ8N3T6 1108 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 ZNF615Q8N8J6 731 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 CATSPER1Q8NEC5 780 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 OR7G2Q8NG99 324 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 OR1N1Q8NGS0 311 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 OR14A16Q8NHC5 309 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 KAT2AQ92830 837 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
CHFR-216ENST00000538235 FBXL20Q96IG2 436 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 LMF1Q96S06 567 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 CNPPD1Q9BV87 410 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 HES7Q9BYE0 225 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 ADNPQ9H2P0 1102 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 GLIPR2Q9H4G4 154 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 WDR41Q9HAD4 459 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 KCNK13Q9HB14 408 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 SLC35C2Q9NQQ7 365 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 AIG1Q9NVV5 245 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 EHD3Q9NZN3 535 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 TMED5Q9Y3A6 229 aa12.16□□□□□ -0.46
CHFR-216ENST00000538235 SPTA1P02549 2419 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 MKRN2OSH3BPM6 223 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 TBX19O60806 448 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 SNUPNO95149 360 aaKnown RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 PORP16435 677 aaPredicted RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 NT5EP21589 574 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 IDH3AP50213 366 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 CDK9P50750 372 aaKnown RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 NME5P56597 212 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 FUT7Q11130 342 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 SF3A3Q12874 501 aaKnown RBP eCLIP12.15□□□□□ -0.462e-7■■■■■ 27.2
CHFR-216ENST00000538235 MFAP5Q13361 173 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 ZNF267Q14586 743 aaPredicted RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 EBPQ15125 230 aaKnown RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 LSM12Q3MHD2 195 aaKnown RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 LACTB2Q53H82 288 aaPredicted RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 ASB18Q6ZVZ8 466 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 IKBIPQ70UQ0 350 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 LRRC25Q8N386 305 aaPredicted RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 ZNF441Q8N8Z8 693 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 OR9I1Q8NGQ6 314 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 DYDC1Q8WWB3 177 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 WBP1Q96G27 269 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 VMP1Q96GC9 406 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 ARHGAP9Q9BRR9 750 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 FAIM2Q9BWQ8 316 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 REEP4Q9H6H4 257 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 SIRT3Q9NTG7 399 aaPredicted RBP12.15□□□□□ -0.46
CHFR-216ENST00000538235 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 TAS2R7Q9NYW3 318 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 ATP6V1HQ9UI12 483 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 GPR45Q9Y5Y3 372 aa12.15□□□□□ -0.46
CHFR-216ENST00000538235 A8MUI8 341 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 OR10H2O60403 315 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 SCN2BO60939 215 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 WDPCPO95876 746 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 LBPP18428 481 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 MC3RP41968 323 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 GSTM5P46439 218 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 MLF1P58340 268 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 C21orf58P58505 322 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 UFM1P61960 85 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 RNF4P78317 190 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 SRSF11Q05519 484 aaKnown RBP12.14□□□□□ -0.47
CHFR-216ENST00000538235 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 ACER2Q5QJU3 275 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 SLC6A19Q695T7 634 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 DESI1Q6ICB0 168 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 ZNF843Q8N446 348 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 ZNF675Q8TD23 568 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 RIT1Q92963 219 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 ZNF764Q96H86 408 aaPredicted RBP12.14□□□□□ -0.47
CHFR-216ENST00000538235 AMDHD1Q96NU7 426 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 SIGLEC12Q96PQ1 595 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 ZNF317Q96PQ6 595 aaPredicted RBP12.14□□□□□ -0.47
CHFR-216ENST00000538235 SLC25A18Q9H1K4 315 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 CDCP1Q9H5V8 836 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 CCDC134Q9H6E4 229 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 FGFR1OP2Q9NVK5 253 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 FAM53CQ9NYF3 392 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 G3BP2Q9UN86 482 aaKnown RBP12.14□□□□□ -0.47
CHFR-216ENST00000538235 CLCA3PQ9Y6N3 262 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 PCNX3Q9H6A9 2034 aa12.14□□□□□ -0.47
CHFR-216ENST00000538235 WWP2O00308 870 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 DIAPH2O60879 1101 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 GUCY1B2O75343 617 aa12.13□□□□□ -0.47
CHFR-216ENST00000538235 WISP2O76076 250 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms