RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PRSS53Q2L4Q9 553 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 CCDC58Q4VC31 144 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 Q5BKY6 102 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 TRIQKQ629K1 86 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 C22orf42Q6IC83 251 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 DPY19L3Q6ZPD9 716 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 HSD11B1LQ7Z5J1 315 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 CAMKK1Q8N5S9 505 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 TMEM163Q8TC26 289 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 UBASH3BQ8TF42 649 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 UFD1Q92890 307 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 SOSTQ9BQB4 213 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 GTPBP2Q9BX10 602 aaKnown RBP11.52□□□□□ -0.56
CPSF7-218ENST00000537641 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.56
CPSF7-218ENST00000537641 MIEF1Q9NQG6 463 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 SEMA3GQ9NS98 782 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 RBFOX1Q9NWB1 397 aaKnown RBP11.52□□□□□ -0.56
CPSF7-218ENST00000537641 ZSCAN32Q9NX65 697 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 TAAR2Q9P1P5 351 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 SF3B6Q9Y3B4 125 aaKnown RBP11.52□□□□□ -0.56
CPSF7-218ENST00000537641 ASB4Q9Y574 426 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 SPIN1Q9Y657 262 aaPredicted RBP11.52□□□□□ -0.56
CPSF7-218ENST00000537641 MYOFQ9NZM1 2061 aa11.52□□□□□ -0.56
CPSF7-218ENST00000537641 DOCK6Q96HP0 2047 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 OR6C70A6NIJ9 312 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 SNTNA6NMZ2 147 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ERVH48-1M5A8F1 160 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 BNIP3LO60238 219 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF780AO75290 641 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-218ENST00000537641 C1orf105O95561 183 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 TIMP1P01033 207 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 TGFB1P01137 390 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ADH1AP07327 375 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 IGFBP1P08833 259 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-218ENST00000537641 CSF2RAP15509 400 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ALAS2P22557 587 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 GABRA5P31644 462 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 PREPP48147 710 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 TGM4P49221 684 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 CLDN20P56880 219 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF284Q2VY69 593 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 RPS26P11Q5JNZ5 115 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-218ENST00000537641 FAM209AQ5JX71 171 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 PAQR6Q6TCH4 344 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 CMTM8Q8IZV2 173 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 HORMAD2Q8N7B1 307 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 PLA2G15Q8NCC3 412 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 C19orf18Q8NEA5 215 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF480Q8WV37 535 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 SLC5A11Q8WWX8 675 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 FGF11Q92914 225 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 SCAMP4Q969E2 229 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF582Q96NG8 517 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF607Q96SK3 696 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 COQ7Q99807 217 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 KATNB1Q9BVA0 655 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 SLC46A2Q9BY10 475 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 SLC6A16Q9GZN6 736 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 IRF2BPLQ9H1B7 796 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 OR51B5Q9H339 312 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 NEUROD4Q9HD90 331 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 TVP23BQ9NYZ1 205 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 NDRG2Q9UN36 371 aaKnown RBP11.52□□□□□ -0.57
CPSF7-218ENST00000537641 KIAA1549LQ6ZVL6 1849 aa11.52□□□□□ -0.57
CPSF7-218ENST00000537641 TSPAN11A1L157 253 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-218ENST00000537641 PRKYO43930 277 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 SLC43A1O75387 559 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 NME6O75414 186 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-218ENST00000537641 GBAP04062 536 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 KLK1P06870 262 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 ACP2P11117 423 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 SLC2A2P11168 524 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-218ENST00000537641 NPPBP16860 134 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 GJA1P17302 382 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 CFL1P23528 166 aaKnown RBP11.51□□□□□ -0.57
CPSF7-218ENST00000537641 PKLRP30613 574 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 ETV5P41161 510 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 ETV1P50549 477 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 DGKEP52429 567 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 GAS1P54826 345 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 P2RX3P56373 397 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 RPS25P62851 125 aaKnown RBP11.51□□□□□ -0.57
CPSF7-218ENST00000537641 HOXC5Q00444 222 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 RAB40BQ12829 278 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 CNTN1Q12860 1018 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 SYT14P1Q58G82 188 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 CD200R1LQ6Q8B3 271 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 NXPE4Q6UWF7 544 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 SLC36A4Q6YBV0 504 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 DEF8Q6ZN54 512 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 YIPF7Q8N8F6 280 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 RASGEF1AQ8N9B8 481 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 KREMEN2Q8NCW0 462 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 SLC38A5Q8WUX1 472 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 GLYATL1Q969I3 302 aa11.51□□□□□ -0.57
CPSF7-218ENST00000537641 RIOK2Q9BVS4 552 aaKnown RBP11.51□□□□□ -0.57
CPSF7-218ENST00000537641 PPP1R3EQ9H7J1 279 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms