RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 NLE1Q9NVX2 485 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 PAK1IP1Q9NWT1 392 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-209ENST00000537178 GXYLT2A0PJZ3 443 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 OTOL1A6NHN0 477 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SOCS5O75159 536 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ADH1BP00325 375 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 CBLP22681 906 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 OR1E2P47887 323 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 GPX6P59796 221 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ID2Q02363 134 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM115Q12893 351 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 MALLQ13021 153 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 MFSD13AQ14CX5 517 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SPHARQ15513 63 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 LRFN4Q6PJG9 635 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM205Q6UW68 189 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 PDZD9Q8IXQ8 264 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 C2CD4AQ8NCU7 369 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 DAZLQ92904 295 aaKnown RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ZDHHC12Q96GR4 267 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SCLYQ96I15 445 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SYT3Q9BQG1 590 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF395Q9H8N7 513 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM100Q9NV29 134 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM98Q9Y2Y6 226 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ST14Q9Y5Y6 855 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 GLOD5A6NK44 160 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 H7BY64 318 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 EMC8O43402 210 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 MSL3P1P0C860 447 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ADORA3P0DMS8 318 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TYRP14679 529 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 POLR2CP19387 275 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 CTHP32929 405 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 GABRA3P34903 492 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 DUSP3P51452 185 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 PCLAFQ15004 111 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 CCDC116Q8IYX3 515 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 HS3ST5Q8IZT8 346 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SLC35F5Q8WV83 523 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 PRAP1Q96NZ9 151 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SSX3Q99909 188 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM246Q9BRR3 403 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF442Q9H7R0 627 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 EDARQ9UNE0 448 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 OR5K4A6NMS3 321 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 UCHL1P09936 223 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 OR8U9P0C7N5 309 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 C1GALT1C1LP0DN25 315 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ACRP10323 421 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 PRKCAP17252 672 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 AK4P27144 223 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 RIDAP52758 137 aaKnown RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 GPR17Q13304 367 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 C11orf91Q3C1V1 193 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 PGM2L1Q6PCE3 622 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 UNC5DQ6UXZ4 953 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 MAPK15Q8TD08 544 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SETD7Q8WTS6 366 aaKnown RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 KCNA7Q96RP8 456 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 STRADBQ9C0K7 418 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM248Q9NWD8 314 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 KCNIP1Q9NZI2 227 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 AJAP1Q9UKB5 411 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 KCTD3Q9Y597 815 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 WNT6Q9Y6F9 365 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 A8MV72 311 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SLC16A5O15375 505 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 PGCP20142 388 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 HTR1EP28566 365 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 KDELR2P33947 212 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 AKR1C2P52895 323 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ACTBP60709 375 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ACTG1P63261 375 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 FOXK1P85037 733 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 NFE2L1Q14494 772 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ARHGAP11AQ6P4F7 1023 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 GSG1LQ6UXU4 331 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 Q6ZVL8 140 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TRIM46Q7Z4K8 759 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF440Q8IYI8 595 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 SGTBQ96EQ0 304 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 BMFQ96LC9 184 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 OR2B2Q9GZK3 357 aa10.19□□□□□ -0.78
CLIP1-209ENST00000537178 FBRSL1Q9HCM7 1045 aaKnown RBP10.19□□□□□ -0.78
CLIP1-209ENST00000537178 TRBV2A0A0J9YWF9 115 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 OR6C6A6NF89 314 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 GRXCR2A6NFK2 248 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CNTN5O94779 1100 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 NAA10P41227 235 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 DCAF12L1Q5VU92 463 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 TMEM151AQ8N4L1 468 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 MR1Q95460 341 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 NAA11Q9BSU3 229 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-209ENST00000537178 CACNG6Q9BXT2 260 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 DNTTIP1Q9H147 329 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 PHYHO14832 338 aa10.18□□□□□ -0.78
CLIP1-209ENST00000537178 PAK4O96013 591 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms