RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 GSDMCQ9BYG8 508 aa17.22■□□□□ 0.35
HTATSF1-204ENST00000535601 KLHL3Q9UH77 587 aa17.22■□□□□ 0.35
HTATSF1-204ENST00000535601 CHRM4P08173 479 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 CPN2P22792 545 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 RGS1Q08116 209 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 RBBP4Q09028 425 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 CRB2Q5IJ48 1285 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 GPR107Q5VW38 600 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 TMEM236Q5W0B7 351 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 TSPYL5Q86VY4 417 aaPredicted RBP17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 ZNF687Q8N1G0 1237 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 OR10G2Q8NGC3 310 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 PHOX2BQ99453 314 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 DGCR6LQ9BY27 220 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 GMEB1Q9Y692 573 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 KDM1AO60341 852 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 IGFBP1P08833 259 aaPredicted RBP17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 NR2F6P10588 404 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 DRD2P14416 443 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 UBE2IP63279 158 aaKnown RBP17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 HOXC5Q00444 222 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 DYNC1I2Q13409 638 aaKnown RBP17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 RAB39AQ14964 217 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 PIWIL3Q7Z3Z3 882 aaKnown RBP17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 AVL9Q8NBF6 648 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 DCUN1D5Q9BTE7 237 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 VCX3AQ9NNX9 186 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 SEC14L3Q9UDX4 400 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 CEP192Q8TEP8 1941 aa17.21■□□□□ 0.35
HTATSF1-204ENST00000535601 NCOR1O75376 2440 aa17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 TRBV4-1A0A0J9YWV2 114 aa17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 GPAT3Q53EU6 434 aa17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 FGD3Q5JSP0 725 aa17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 METTL27Q8N6F8 245 aaPredicted RBP17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 LMX1AQ8TE12 382 aa17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 OCEL1Q9H607 264 aa17.21■□□□□ 0.34
HTATSF1-204ENST00000535601 SGK494L7N484 410 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 CDC123O75794 336 aaPredicted RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 MFN2O95140 757 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 DCNP07585 359 aaKnown RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 RPP38P78345 283 aaKnown RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 CDK5R2Q13319 367 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 DEFB133Q30KQ1 61 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 KLHL17Q6TDP4 642 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 FAM92BQ6ZTR7 304 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 ARMC8Q8IUR7 673 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 B4GALNT2Q8NHY0 566 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 GIPC3Q8TF64 312 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 RAD21L1Q9H4I0 556 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 SLC2A4RGQ9NR83 387 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 ACSS1Q9NUB1 689 aaPredicted RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 ACER3Q9NUN7 267 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 PCDHGB3Q9Y5G1 929 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 SLC1A7O00341 560 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 FOXD2O60548 495 aaPredicted RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 BMP10O95393 424 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 CD247P20963 164 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 PIN1Q13526 163 aaPredicted RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 GPR141Q7Z602 305 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 PARGQ86W56 976 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 OR7G2Q8NG99 324 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 GEMIN6Q8WXD5 167 aaKnown RBP17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 HLA-CQ95604 372 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 SLC22A18Q96BI1 424 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 TBC1D20Q96BZ9 403 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 ZFYVE21Q9BQ24 234 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 PILRAQ9UKJ1 303 aa17.2■□□□□ 0.34
HTATSF1-204ENST00000535601 NDUFS2O75306 463 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 CSNK2A2P19784 350 aaPredicted RBP17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 HLCSP50747 726 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 XKP51811 444 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 SHC2P98077 582 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 RPL6Q02878 288 aaKnown RBP17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 NPRL3Q12980 569 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 ARHGAP22Q7Z5H3 698 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 B3GNT8Q7Z7M8 397 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 GAL3ST3Q96A11 431 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 HSPA12BQ96MM6 686 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 TAS2R7Q9NYW3 318 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 DMTF1Q9Y222 760 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 GLULP15104 373 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 POU1F1P28069 291 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 BUD31P41223 144 aaPredicted RBP17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 XCR1P46094 333 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 IDH2P48735 452 aaKnown RBP17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 CSNK1EP49674 416 aaKnown RBP17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 CCDC80Q76M96 950 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 C11orf74Q86VG3 221 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 NUP43Q8NFH3 380 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 ZNF681Q96N22 645 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 SARGQ9BW04 601 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 GABARAPL1Q9H0R8 117 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 A4GALTQ9NPC4 353 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 KCMF1Q9P0J7 381 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 NAALAD2Q9Y3Q0 740 aa17.19■□□□□ 0.34
HTATSF1-204ENST00000535601 FAM32AQ9Y421 112 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms