RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 PLA2G10O15496 165 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CTSAP10619 480 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 PRKCAP17252 672 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 S100A1P23297 94 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 MYL9P24844 172 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 DGKGP49619 791 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 MAPK12P53778 367 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 AP1S2P56377 157 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 FABP5Q01469 135 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SMU1Q2TAY7 513 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 LHX8Q68G74 356 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 PGBD2Q6P3X8 592 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ANKRD53Q8N9V6 530 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 OR52I1Q8NGK6 324 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CLIP3Q96DZ5 547 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 FCRL4Q96PJ5 515 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 NXF2Q9GZY0 626 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 C6orf106Q9H6K1 298 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SSR3Q9UNL2 185 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 AP3M1Q9Y2T2 418 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CSNK1G3Q9Y6M4 447 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 FRMPD3Q5JV73 1810 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ZNF197O14709 1029 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CASKO14936 926 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 TMPRSS11DO60235 418 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 C8AP07357 584 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 NR2F1P10589 423 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CELP19835 753 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 GPR4P46093 362 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 RFX3P48380 749 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 HEPACAMQ14CZ8 416 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CBARPQ8N350 705 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 DNAJB8Q8NHS0 232 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ECHDC3Q96DC8 303 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 FAM46AQ96IP4 442 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 FOPNLQ96NB1 174 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CCDC86Q9H6F5 360 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CCDC59Q9P031 241 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ANGPT4Q9Y264 503 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 F5P12259 2224 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 TRBV23OR9-2A0A075B6M9 112 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 A0A0B4J203 849 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 B4DXG7 233 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CAPN5O15484 640 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 LRG1P02750 347 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ASMTP46597 345 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SLC16A1P53985 500 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 DUSP2Q05923 314 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 CAMK1Q14012 370 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SPIN4Q56A73 249 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 SAXO2Q658L1 398 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ZNF57Q68EA5 555 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ZNF770Q6IQ21 691 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 REEP3Q6NUK4 255 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 PARS2Q7L3T8 475 aaKnown RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ADIPOR2Q86V24 386 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 C12orf40Q86WS4 652 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 BTN2A2Q8WVV5 523 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 TAPBPLQ9BX59 468 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 PLCXD1Q9NUJ7 323 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 PLEKHB1Q9UF11 243 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 MKLN1Q9UL63 735 aa13.16□□□□□ -0.3
LPCAT3-203ENST00000535479 TRAV6A0A075B6T7 132 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 SCG5P05408 212 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 FCER2P06734 321 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 H1F0P07305 194 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 MTA1Q13330 715 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 ZNF547Q8IVP9 402 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 TREX2Q9BQ50 279 aaPredicted RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 ATP6V1HQ9UI12 483 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 ISM1B1AKI9 464 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 HMGN4O00479 90 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 LCMT2O60294 686 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 PIP5K1CO60331 668 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 SOD2P04179 222 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 MRPL3P09001 348 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 C1GALT1C1LP0DN25 315 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 PRPH2P23942 346 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 EVI2BP34910 448 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 HTRA3P83110 453 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 SYT14P1Q58G82 188 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 FAM71E1Q6IPT2 247 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms