RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DDX1Q92499 740 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC25A44Q96H78 314 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SECISBP2Q96T21 854 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF559Q9BR84 538 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ADAMTS10Q9H324 1103 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF451Q9Y4E5 1061 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SRYQ05066 204 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 TCTE1Q5JU00 501 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 FIGLAQ6QHK4 219 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 CEACAM19Q7Z692 300 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 NEIL3Q8TAT5 605 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 CD300LFQ8TDQ1 290 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 KLHL21Q9UJP4 597 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 ROBO1Q9Y6N7 1651 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 AFDNP55196 1824 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 S1PR4O95977 384 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 POU3F4P49335 361 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 LBX1P52954 281 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 SNU13P55769 128 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 ATAD3CQ5T2N8 411 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 FAM43BQ6ZT52 329 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 MFSD8Q8NHS3 518 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 OR1A2Q9Y585 309 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 TRAV6A0A075B6T7 132 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 TGM5O43548 720 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 NARSO43776 548 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 GPR32O75388 356 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 ATP6AP1Q15904 470 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 RTP2Q5QGT7 225 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 XKRXQ6PP77 449 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 LRRN1Q6UXK5 716 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 OR4N5Q8IXE1 308 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 APCDD1Q8J025 514 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 OR8K5Q8NH50 307 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 CREB3L1Q96BA8 519 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 DDIT4LQ96D03 193 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 RDH12Q96NR8 316 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 LPAR4Q99677 370 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 TMEM59LQ9UK28 342 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 ADAM18Q9Y3Q7 739 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 GXYLT2A0PJZ3 443 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 MAFKO60675 156 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC10A3P09131 477 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 IFNGR1P15260 489 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 AMY2BP19961 511 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 GLDCP23378 1020 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 TMEM69Q5SWH9 247 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 EMC10Q5UCC4 262 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 ARHGAP11AQ6P4F7 1023 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 OR14L1PQ8NHC6 308 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 TRMT10AQ8TBZ6 339 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 FAM3CQ92520 227 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF442Q9H7R0 627 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 NANSQ9NR45 359 aa17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 PTBP2Q9UKA9 531 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-203ENST00000535236 AFF1P51825 1210 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 DSC1Q08554 894 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 UNC5DQ6UXZ4 953 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 NFAT5O94916 1531 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF850A8MQ14 1090 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 SHC2P98077 582 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 GRB7Q14451 532 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 TMPRSS12Q86WS5 348 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 KLHL15Q96M94 604 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 DNTTIP1Q9H147 329 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 K7ERQ8 282 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 BRINP1O60477 761 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 DIRAS3O95661 229 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 GRPRP30550 384 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 ACTA2P62736 377 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 ACTG2P63267 376 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 VTCN1Q7Z7D3 282 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 WDR20Q8TBZ3 569 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 MKS1Q9NXB0 559 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 GNAO1P09471 354 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 CKMT1AP12532 417 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 LARP4Q71RC2 724 aaKnown RBP eCLIP17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 PDSS2Q86YH6 399 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF175Q9Y473 711 aa17.35■□□□□ 0.37
SFSWAP-203ENST00000535236 SNAPC5O75971 98 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 SLITRK5O94991 958 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 IFNA5P01569 189 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 SOX9P48436 509 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 LIPKQ5VXJ0 399 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 HUS1BQ8NHY5 278 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 NANOS1Q8WY41 292 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 GPRC5BQ9NZH0 403 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 KCNIP1Q9NZI2 227 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 A0A1W2PPK0 400 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 GJE1A6NN92 205 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 APOL3O95236 402 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 ADRB3P13945 408 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 UNC50Q53HI1 259 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 HS3ST5Q8IZT8 346 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 TMIEQ8NEW7 156 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 XYLT2Q9H1B5 865 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 A8MVJ9 347 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 TAS2R38P59533 333 aa17.34■□□□□ 0.37
SFSWAP-203ENST00000535236 RPS26P62854 115 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms