RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 OR51B5Q9H339 312 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 CALHM2Q9HA72 323 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 POPDC3Q9HBV1 291 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 GALNT8Q9NY28 637 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 CD274Q9NZQ7 290 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
CTSB-230ENST00000534149 OR6C76A6NM76 312 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 WASHC1A8K0Z3 465 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 ERN1O75460 977 aaKnown RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 PIAS1O75925 651 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 WISP3O95389 354 aaPredicted RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 IVDP26440 423 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 SOX18P35713 384 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 CASP2P42575 452 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 SLCO1A2P46721 670 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 CPA2P48052 419 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 SLC12A2P55011 1212 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 FOXF2Q12947 444 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 BIKQ13323 160 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 FRG1Q14331 258 aaKnown RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 TBCCQ15814 346 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 NHSL2Q5HYW2 709 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 KHDRBS2Q5VWX1 349 aaKnown RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 MED27Q6P2C8 311 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 GPR180Q86V85 440 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 PACS2Q86VP3 889 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 LAS2Q8IYD9 372 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 ZNF441Q8N8Z8 693 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 PDPRQ8NCN5 879 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 SPPL2AQ8TCT8 520 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 SMPDL3BQ92485 455 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 RIT1Q92963 219 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 CMTM7Q96FZ5 175 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 PELOQ9BRX2 385 aaKnown RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 ANGPTL4Q9BY76 406 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 RHOJQ9H4E5 214 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 CAB39LQ9H9S4 337 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 TEX10Q9NXF1 929 aaPredicted RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 MS4A12Q9NXJ0 267 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 PHF11Q9UIL8 331 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 PTBP2Q9UKA9 531 aaKnown RBP13.64□□□□□ -0.23
CTSB-230ENST00000534149 IKBKGQ9Y6K9 419 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 MED12LQ86YW9 2145 aa13.64□□□□□ -0.23
CTSB-230ENST00000534149 COL6A5A8TX70 2615 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 C2orf92A0A1B0GVN3 265 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 GLOD5A6NK44 160 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 CAPN14A8MX76 684 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 GNB5O14775 395 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 SMAD7O15105 426 aaKnown RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 PHGDHO43175 533 aaKnown RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 SNX4O95219 450 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 TLX1P31314 330 aaPredicted RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 SSTR4P31391 388 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 RAP1GDS1P52306 607 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 NAGLUP54802 743 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 DDX39BQ13838 428 aaKnown RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 RCAN2Q14206 197 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 E2F2Q14209 437 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 FASTKD3Q14CZ7 662 aaKnown RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 MORF4L2Q15014 288 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 CDKL4Q5MAI5 379 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 DEPDC1Q5TB30 811 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 PLXDC2Q6UX71 529 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 LRRN4CLQ8ND94 238 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 ACTRT1Q8TDG2 376 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 UBE2E3Q969T4 207 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 ISL2Q96A47 359 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 LRRC39Q96DD0 335 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 Q96MF0 132 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 MCMBPQ9BTE3 642 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 SNX15Q9NRS6 342 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 PPP2R2CQ9Y2T4 447 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
CTSB-230ENST00000534149 NPFFR2Q9Y5X5 522 aa13.63□□□□□ -0.23
CTSB-230ENST00000534149 PLPP1O14494 284 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 CASKO14936 926 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 SMPD2O60906 423 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 GPR75O95800 540 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 S100BP04271 92 aaPredicted RBP13.62□□□□□ -0.23
CTSB-230ENST00000534149 CYP4B1P13584 511 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 CD1DP15813 335 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 BUD31P41223 144 aaPredicted RBP13.62□□□□□ -0.23
CTSB-230ENST00000534149 CASP3P42574 277 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 POU4F1Q01851 419 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 LRRC70Q7Z2Q7 622 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 YRDCQ86U90 279 aaKnown RBP13.62□□□□□ -0.23
CTSB-230ENST00000534149 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 ZCCHC7Q8N3Z6 543 aaKnown RBP13.62□□□□□ -0.23
CTSB-230ENST00000534149 FAM83FQ8NEG4 500 aaPredicted RBP13.62□□□□□ -0.23
CTSB-230ENST00000534149 SLC44A1Q8WWI5 657 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 RGMAQ96B86 450 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 TMEM41AQ96HV5 264 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 OSBPL9Q96SU4 736 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
CTSB-230ENST00000534149 REPIN1Q9BWE0 567 aaKnown RBP13.62□□□□□ -0.23
CTSB-230ENST00000534149 SFXN3Q9BWM7 321 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms