RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 NAGLUP54802 743 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 NR1H2P55055 460 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 GNG11P61952 73 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 CDKL1Q00532 357 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 DOC2AQ14183 400 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 EBPQ15125 230 aaKnown RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 SPANXN3Q5MJ09 141 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 TTC27Q6P3X3 843 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 ANGPTL8Q6UXH0 198 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 UBE3DQ7Z6J8 389 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 ADAMTSL2Q86TH1 951 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 SLC35F6Q8N357 371 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 NKAPQ8N5F7 415 aaKnown RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 BBOF1Q8ND07 529 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 MAPK1IP1LQ8NDC0 245 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 SRFBP1Q8NEF9 429 aaKnown RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 FAM83FQ8NEG4 500 aaPredicted RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 PPP1R14CQ8TAE6 165 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 RDH11Q8TC12 318 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 SPPL2AQ8TCT8 520 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 ZPLD1Q8TCW7 415 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 ESAMQ96AP7 390 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 RHBDF1Q96CC6 855 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 CERS2Q96G23 380 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 PDLIM5Q96HC4 596 aaKnown RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 WFIKKN1Q96NZ8 548 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 SECISBP2Q96T21 854 aaKnown RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 PIGQQ9BRB3 760 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 TBCDQ9BTW9 1192 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 CAPS2Q9BXY5 557 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 MS4A8Q9BY19 250 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 PITHD1Q9GZP4 211 aaPredicted RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 UBQLN3Q9H347 655 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 PIGMQ9H3S5 423 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 RPF2Q9H7B2 306 aaKnown RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 NT5DC2Q9H857 520 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 RRAGDQ9NQL2 400 aaPredicted RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 DNAJC11Q9NVH1 559 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 ZNF226Q9NYT6 803 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 PACSIN3Q9UKS6 424 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 ZNF490Q9ULM2 529 aaPredicted RBP8.43□□□□□ -1.06
PACS1-214ENST00000533811 WIF1Q9Y5W5 379 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 NPFFR2Q9Y5X5 522 aa8.43□□□□□ -1.06
PACS1-214ENST00000533811 RAI1Q7Z5J4 1906 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 ABCA1O95477 2261 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 C2orf92A0A1B0GVN3 265 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 ANKRD33BA6NCL7 494 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 PRAMEF4O60810 478 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 RCBTB2O95199 551 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 SNX4O95219 450 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 TTC4O95801 387 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 ACTL6AO96019 429 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 TGFB1P01137 390 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 KRT15P19012 456 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 HIST1H1TP22492 207 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 TCEA1P23193 301 aaKnown RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 TLX1P31314 330 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 HSPA7P48741 367 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 TMED10P49755 219 aaKnown RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 RAP1GDS1P52306 607 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 RPP38P78345 283 aaKnown RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 IGLV3-21P80748 117 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 DMTNQ08495 405 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 FAM27E3Q08E93 113 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 SLAMF1Q13291 335 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 DDX39BQ13838 428 aaKnown RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 HIST2H2ACQ16777 129 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 NHSL2Q5HYW2 709 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 PAGE2BQ5JRK9 111 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 HP1BP3Q5SSJ5 553 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 C10orf62Q5T681 223 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 TEDDM1Q5T9Z0 273 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 FNDC7Q5VTL7 733 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 PRAMEF9Q5VWM5 478 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 HIST2H2AA3Q6FI13 130 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 C20orf204Q6ZNR8 217 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 ZNF550Q7Z398 422 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 P4HA3Q7Z4N8 544 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 GRAMD2AQ8IUY3 354 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 CNTN4Q8IWV2 1026 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 PPIL6Q8IXY8 311 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 CNEP1R1Q8N9A8 125 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 NAT8LQ8N9F0 302 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 OR1J4Q8NGS1 313 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 RIT1Q92963 219 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 EXT2Q93063 718 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 PTCD3Q96EY7 689 aaKnown RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 VPS39Q96JC1 886 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 PBKQ96KB5 322 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 C16orf45Q96MC5 204 aaPredicted RBP8.42□□□□□ -1.06
PACS1-214ENST00000533811 ZFP3Q96NJ6 502 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 ANGPTL4Q9BY76 406 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 OR51B5Q9H339 312 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 ACBD3Q9H3P7 528 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 METTL7AQ9H8H3 244 aa8.42□□□□□ -1.06
PACS1-214ENST00000533811 SNX15Q9NRS6 342 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms