RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 MCUQ8NE86 351 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 MCOLN3Q8TDD5 553 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 ANKRD49Q8WVL7 239 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 MAIP1Q8WWC4 291 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 MVB12AQ96EY5 273 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 SNF8Q96H20 258 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 OSBPL9Q96SU4 736 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 EBNA1BP2Q99848 306 aaKnown RBP5.54□□□□□ -1.52
SOX6-216ENST00000533658 TUBB6Q9BUF5 446 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 CAB39LQ9H9S4 337 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 PARVBQ9HBI1 364 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 XAB2Q9HCS7 855 aaKnown RBP5.54□□□□□ -1.52
SOX6-216ENST00000533658 SMYD2Q9NRG4 433 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 ABI3Q9P2A4 366 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 ZKSCAN5Q9Y2L8 839 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
SOX6-216ENST00000533658 MYO7BQ6PIF6 2116 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 KCNE1BA0A087WTH5 132 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 TRBV11-1A0A0K0K1C0 115 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 GOLGA6L6A8MZA4 724 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 H0YIG0 161 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 AP3B1O00203 1094 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 PGRMC1O00264 195 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 DNALI1O14645 258 aaPredicted RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 TTI1O43156 1089 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 PRPF4O43172 522 aaKnown RBP eCLIP5.53□□□□□ -1.52
SOX6-216ENST00000533658 CDC40O60508 579 aaKnown RBP eCLIP5.53□□□□□ -1.52
SOX6-216ENST00000533658 GALR3O60755 368 aaPredicted RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 PRAMEF4O60810 478 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 SP1P08047 785 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 MLNP12872 115 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 ENO3P13929 434 aaPredicted RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 ALOX12P18054 663 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 FDXRP22570 491 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 IVDP26440 423 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 EEF1DP29692 281 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 HNRNPH1P31943 449 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 HSD17B2P37059 387 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 CCR8P51685 355 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 ITGA8P53708 1063 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 IL2P60568 153 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 BTN3A2P78410 334 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 DGCR2P98153 550 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 PTK6Q13882 451 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 RUNX2Q13950 521 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 KRT72Q14CN4 511 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 TSNQ15631 228 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 PRAMEF9Q5VWM5 478 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 H3F3CQ6NXT2 135 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 LCTLQ6UWM7 567 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 SBSNQ6UWP8 590 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 THOC6Q86W42 341 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 SIAH3Q8IW03 269 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.53□□□□□ -1.52
SOX6-216ENST00000533658 RNF175Q8N4F7 328 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 MARVELD2Q8N4S9 558 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 CAMKVQ8NCB2 501 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 OR56A3Q8NH54 315 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 SUN3Q8TAQ9 357 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 UTP15Q8TED0 518 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 AGAP11Q8TF27 550 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 CCT6BQ92526 530 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 NRGNQ92686 78 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 GCDHQ92947 438 aaPredicted RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 EXT2Q93063 718 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 GFM2Q969S9 779 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 TBC1D20Q96BZ9 403 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 CERS2Q96G23 380 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 VPS50Q96JG6 964 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 PDLIM2Q96JY6 352 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 ZNF354BQ96LW1 612 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 GPR137Q96N19 417 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 CSF3RQ99062 836 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 UTP23Q9BRU9 249 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 FAM167BQ9BTA0 163 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 UCK2Q9BZX2 261 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 PNO1Q9NRX1 252 aaKnown RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 HOMER3Q9NSC5 361 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 TAS2R13Q9NYV9 303 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 LRFN1Q9P244 771 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 ZNF223Q9UK11 482 aaPredicted RBP5.53□□□□□ -1.52
SOX6-216ENST00000533658 SLC22A14Q9Y267 594 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 SCN2AQ99250 2005 aa5.53□□□□□ -1.52
SOX6-216ENST00000533658 MAP1AP78559 2803 aaPredicted RBP5.52□□□□□ -1.53
SOX6-216ENST00000533658 HEATR5BQ9P2D3 2071 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 CPAMD8Q8IZJ3 1885 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 A0A1B0GTH9 108 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 MAGEB16A2A368 324 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 NKX2-6A6NCS4 301 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 WASHC1A8K0Z3 465 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 FAM166BA8MTA8 275 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 MAGEB17A8MXT2 336 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 CXorf49A8MYA2 514 aaPredicted RBP5.52□□□□□ -1.53
SOX6-216ENST00000533658 SAP18O00422 153 aaKnown RBP5.52□□□□□ -1.53
SOX6-216ENST00000533658 RTCAO00442 366 aaKnown RBP5.52□□□□□ -1.53
SOX6-216ENST00000533658 TXNDC9O14530 226 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 ADAM10O14672 748 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 TP73O15350 636 aa5.52□□□□□ -1.53
SOX6-216ENST00000533658 PHGDHO43175 533 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms