RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 TERF1P54274 439 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ATP5J2P56134 94 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 SLC37A1P57057 533 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 FBXW4P57775 412 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 HERVK_113P63132 956 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ERVK-8P63133 956 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 CDKL1Q00532 357 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 TGM3Q08188 693 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 CLEC12BQ2HXU8 276 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 SPRED3Q2MJR0 410 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 CHRFAM7AQ494W8 412 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 C10orf62Q5T681 223 aaPredicted RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 TIGD3Q6B0B8 471 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ADNP2Q6IQ32 1131 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ZNF474Q6S9Z5 364 aaPredicted RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 SCIMPQ6UWF3 145 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 PLXDC2Q6UX71 529 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 RNF111Q6ZNA4 994 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 C22orf34Q6ZV56 151 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 YRDCQ86U90 279 aaKnown RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 OR4N5Q8IXE1 308 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 KRT78Q8N1N4 520 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ACOT4Q8N9L9 421 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 MCUQ8NE86 351 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 UCN3Q969E3 161 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 TP53INP1Q96A56 240 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 RBM18Q96H35 190 aaKnown RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 SIGLEC10Q96LC7 697 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 SERPINB12Q96P63 405 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 KCNC2Q96PR1 638 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 F2RL3Q96RI0 385 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 GAL3ST4Q96RP7 486 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 TBCDQ9BTW9 1192 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ERVK-6Q9BXR3 956 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 REG4Q9BYZ8 158 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 EHD1Q9H4M9 534 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 XAB2Q9HCS7 855 aaKnown RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 TEX10Q9NXF1 929 aaPredicted RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 WWOXQ9NZC7 414 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ZNF490Q9ULM2 529 aaPredicted RBP7.08□□□□□ -1.28
NXF1-215ENST00000533440 ERVK-19Q9WJR5 959 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 ZKSCAN5Q9Y2L8 839 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 SPACA6W5XKT8 324 aa7.08□□□□□ -1.28
NXF1-215ENST00000533440 H0Y3Z8 333 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 GNB5O14775 395 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 HCRTR2O43614 444 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 PRAMEF4O60810 478 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 CDH16O75309 829 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 WDR47O94967 919 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 TGM6O95932 706 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ALOX15P16050 662 aaPredicted RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 HIST1H1TP22492 207 aaPredicted RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 CPN2P22792 545 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 GDF5P43026 501 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 TMED10P49755 219 aaKnown RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 GFRA1P56159 465 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 PLIN5Q00G26 463 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 FUT7Q11130 342 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 KIF5AQ12840 1032 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 VEZF1Q14119 521 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ZNF267Q14586 743 aaPredicted RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 TOMM20Q15388 145 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 TRIP13Q15645 432 aaPredicted RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 ETFDHQ16134 617 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 PRAMEF9Q5VWM5 478 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 TMEM81Q6P7N7 255 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ENPP6Q6UWR7 440 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 TMEM64Q6YI46 380 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 SH2D5Q6ZV89 423 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ZNF550Q7Z398 422 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 MILR1Q7Z6M3 343 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 GALNT7Q86SF2 657 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 CNTN4Q8IWV2 1026 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ST13P4Q8IZP2 240 aaPredicted RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 ZNF611Q8N823 705 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 SRFBP1Q8NEF9 429 aaKnown RBP7.07□□□□□ -1.28
NXF1-215ENST00000533440 OR1J4Q8NGS1 313 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 DOK4Q8TEW6 326 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ANKRD7Q92527 254 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 CAVIN3Q969G5 261 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 FAM111AQ96PZ2 611 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 CAPS2Q9BXY5 557 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 OR2B2Q9GZK3 357 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 YAE1D1Q9NRH1 226 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 SNX15Q9NRS6 342 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 PSD3Q9NYI0 1048 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 ELOVL5Q9NYP7 299 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 GPRC5BQ9NZH0 403 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 OARD1Q9Y530 152 aa7.07□□□□□ -1.28
NXF1-215ENST00000533440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.284e-9■■■■■ 34.1
NXF1-215ENST00000533440 C2orf92A0A1B0GVN3 265 aa7.06□□□□□ -1.28
NXF1-215ENST00000533440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
NXF1-215ENST00000533440 FRG2CA6NGY1 282 aa7.06□□□□□ -1.28
NXF1-215ENST00000533440 A8MV72 311 aaPredicted RBP7.06□□□□□ -1.28
NXF1-215ENST00000533440 C16orf97H3BN30 126 aa7.06□□□□□ -1.28
NXF1-215ENST00000533440 OVOL3O00110 214 aa7.06□□□□□ -1.28
NXF1-215ENST00000533440 CDC7O00311 574 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms