RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 RGS14O43566 566 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 PEX11AO75192 247 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCNDBP1O95273 360 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 MED26O95402 600 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 LY6G6DO95868 133 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 SERPINA6P08185 405 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 PCNAP12004 261 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 LBPP18428 481 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 PCSK6P29122 969 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 PEX19P40855 299 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 EMP3P54852 163 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 OC90Q02509 493 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 KEAP1Q14145 624 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 RBBP5Q15291 538 aaKnown RBP10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZSCAN26Q16670 478 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 BTBD16Q32M84 506 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 PLAG1Q6DJT9 500 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 ARSKQ6UWY0 536 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 PAMR1Q6UXH9 720 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 RNF165Q6ZSG1 346 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 CDC20BQ86Y33 519 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 LAS2Q8IYD9 372 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZNF740Q8NDX6 193 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 OR2L3Q8NG85 312 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 OR2T11Q8NH01 316 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 WDR20Q8TBZ3 569 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 METTL21AQ8WXB1 218 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 UBE2E3Q969T4 207 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 MVB12AQ96EY5 273 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 AIF1LQ9BQI0 150 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 NMUR2Q9GZQ4 415 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 MYLK2Q9H1R3 596 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 SAR1AQ9NR31 198 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 TMEM184CQ9NVA4 438 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 GIMAP2Q9UG22 337 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZFP69BQ9UJL9 534 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 TRIM33Q9UPN9 1127 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCL27Q9Y4X3 112 aa10.55□□□□□ -0.72
TRAPPC4-213ENST00000533149 JMJD1CQ15652 2540 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 FN1P02751 2386 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 IGKV1-8A0A0C4DH67 115 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 A0A1B0GTH9 108 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 UBDO15205 165 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 C8orf89P0DMQ9 161 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 HRH2P25021 359 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 PTGER1P34995 402 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 PPP2R2BQ00005 443 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 REEP5Q00765 189 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 PMPCAQ10713 525 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 DDX39BQ13838 428 aaKnown RBP10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 MAPKAPK3Q16644 382 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 IMPG1Q17R60 797 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 C6orf136Q5SQH8 315 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 FCRLBQ6BAA4 426 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 TMIGD1Q6UXZ0 262 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 CHSY3Q70JA7 882 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 ADCK2Q7Z695 626 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 PAQR7Q86WK9 346 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 RNF175Q8N4F7 328 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 GBP7Q8N8V2 638 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 POGLUT1Q8NBL1 392 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 REPS1Q96D71 796 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 DPH7Q9BTV6 452 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 NT5DC2Q9H857 520 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
TRAPPC4-213ENST00000533149 ERICH4A6NGS2 130 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 FOXE1O00358 373 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 TFECO14948 347 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 LCMT2O60294 686 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 PRMT3O60678 531 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 CTSVO60911 334 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 ATE1O95260 518 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 EIF2S1P05198 315 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 HSD3B1P14060 373 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 HSD3B2P26439 372 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 KIR2DL3P43628 341 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 AP5B1Q2VPB7 878 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 RNFT1Q5M7Z0 435 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 SHEQ5VZ18 495 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 FRMPD2BQ6IN97 320 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 SPATA19Q7Z5L4 167 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 CLNKQ7Z7G1 428 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 PLD3Q8IV08 490 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 SLC5A8Q8N695 610 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 HUS1BQ8NHY5 278 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 ERP27Q96DN0 273 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 PPP3R2Q96LZ3 170 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 MTERF1Q99551 399 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 SARGQ9BW04 601 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 ACPTQ9BZG2 426 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 SLC6A16Q9GZN6 736 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 PITHD1Q9GZP4 211 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 LRTM1Q9HBL6 345 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 ARMCX1Q9P291 453 aa10.53□□□□□ -0.72
TRAPPC4-213ENST00000533149 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms