RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 KLHDC8BQ8IXV7 354 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 FADS6Q8N9I5 356 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 MLKLQ8NB16 471 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 DDHD1Q8NEL9 900 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 OR2T34Q8NGX1 318 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 OR6F1Q8NGZ6 308 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 OR4F5Q8NH21 305 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 SLC25A36Q96CQ1 311 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 VPS39Q96JC1 886 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TESK2Q96S53 571 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 KRT12Q99456 494 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 EPYCQ99645 322 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 ERP44Q9BS26 406 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 WRAP53Q9BUR4 548 aaKnown RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 ZNF416Q9BWM5 594 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 CARD6Q9BX69 1037 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 NACA2Q9H009 215 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 RAB33BQ9H082 229 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 ZNF696Q9H7X3 374 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 PLEKHA3Q9HB20 300 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 UBE2TQ9NPD8 197 aaPredicted RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 SPHK2Q9NRA0 654 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 NLGN3Q9NZ94 848 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TMOD2Q9NZR1 351 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 BCAP29Q9UHQ4 241 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 LAMP5Q9UJQ1 280 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 PROCRQ9UNN8 238 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 RNF215Q9Y6U7 377 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 ZHX2Q9Y6X8 837 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 PARD3Q8TEW0 1356 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 MEX3AA1L020 520 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 EME2A4GXA9 379 aaPredicted RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 ANKRD30BLA7E2S9 258 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 E9PMD0 336 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 SGK494L7N484 410 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 MTRF1O75570 445 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 OR4F21O95013 312 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 PRAMEF12O95522 483 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 GOT2P00505 430 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 CALCBP10092 127 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 MBL2P11226 248 aaPredicted RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 KRT13P13646 458 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 PAICSP22234 425 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 SOX6P35712 828 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 PTGFRP43088 359 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 HNMTP50135 292 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 CRYBA2P53672 197 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 ABCE1P61221 599 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 RPS27AP62979 156 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 DHODHQ02127 395 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 NFATC2Q13469 925 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 HAGHQ16775 308 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 UPP1Q16831 310 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 KNOP1Q1ED39 458 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 SGSM1Q2NKQ1 1148 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 HKDC1Q2TB90 917 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 ANKRD55Q3KP44 614 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 WDR25Q64LD2 544 aaPredicted RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 RHBDD2Q6NTF9 364 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 CWC27Q6UX04 472 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 C3P1Q6ZMU1 363 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 DPY19L2P2Q6ZN68 376 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 ASRGL1Q7L266 308 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 CHMP1BQ7LBR1 199 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 GOLGA7Q7Z5G4 137 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 ZER1Q7Z7L7 766 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 KCNMB4Q86W47 210 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 CARM1Q86X55 608 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 UNC5CLQ8IV45 518 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 LINC00518Q8N0U6 118 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 GCNT2Q8N0V5 402 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 OR10G7Q8NGN6 311 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 WDR36Q8NI36 951 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 ZNF519Q8TB69 540 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 MRGPRDQ8TDS7 321 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 TCP11Q8WWU5 503 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 TXN2Q99757 166 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 GPA33Q99795 319 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 FICDQ9BVA6 458 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 RAB11FIP5Q9BXF6 653 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 LRRCC1Q9C099 1032 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 MED20Q9H944 212 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 TEX10Q9NXF1 929 aaPredicted RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 CHRNA9Q9UGM1 479 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 B9D1Q9UPM9 204 aa2.5□□□□□ -2.01
CD44-234ENST00000531873 MRPS28Q9Y2Q9 187 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.5□□□□□ -2.01
CD44-234ENST00000531873 A0A0A6YYD4 124 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.49□□□□□ -2.01
CD44-234ENST00000531873 MPTX1A8MV57 137 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 H0YL77 283 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 H3BMH7 237 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 SDHDO14521 159 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZNF749O43361 778 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 TOXO94900 526 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 NXPH2O95156 264 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 CHRNA1P02708 482 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 PCCBP05166 539 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 CCDC159P0C7I6 412 aa2.49□□□□□ -2.01
CD44-234ENST00000531873 ZSCAN5DPP0CG00 497 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms