RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TRAPPC6AO75865 159 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 AIFM1O95831 613 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 GBAP04062 536 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 NR2F6P10588 404 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 BSGP35613 385 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 ASCL1P50553 236 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 PPP2R2AP63151 447 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 IRF9Q00978 393 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 FLYWCH1Q4VC44 716 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 MRM1Q6IN84 353 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 POMZP3Q6PJE2 187 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 CYS1Q717R9 158 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 CDC20BQ86Y33 519 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 KCTD4Q8WVF5 259 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 PELOQ9BRX2 385 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 ERP44Q9BS26 406 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 ACTR8Q9H981 624 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 LYARQ9NX58 379 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 GRHL1Q9NZI5 618 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 CBLCQ9ULV8 474 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 ANGPTL3Q9Y5C1 460 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 C2orf92A0A1B0GVN3 265 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 OR6C76A6NM76 312 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 ACSL3O95573 720 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 EPPINO95925 133 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 FAM58BPP0C7Q3 252 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 HOXB4P17483 251 aaPredicted RBP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 CEACAM8P31997 349 aaPredicted RBP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 FOXD4Q12950 439 aaPredicted RBP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 RPS6KA2Q15349 733 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 CPSF6Q16630 551 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 CYP20A1Q6UW02 462 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 CENPLQ8N0S6 344 aaPredicted RBP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 TAGAPQ8N103 731 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 ZNF441Q8N8Z8 693 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 GOT1L1Q8NHS2 421 aaPredicted RBP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 RNASE6Q93091 150 aaKnown RBP16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 RILPQ96NA2 401 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 TIMP4Q99727 224 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 SLC6A5Q9Y345 797 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 PCDHGA11Q9Y5H2 935 aa16.88■□□□□ 0.29
SSSCA1-206ENST00000531405 AHRRA9YTQ3 701 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 PGRMC2O15173 223 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 RAD51CO43502 376 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 CT62P0C5K7 136 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 DNASE1P24855 282 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 TACR1P25103 407 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 PTX3P26022 381 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 CRABP2P29373 138 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 PIK3CGP48736 1102 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 NEK2P51955 445 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 ZNF136P52737 540 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 SETDB1Q15047 1291 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 PFKFB4Q16877 469 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 DCST1Q5T197 706 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 FNDC7Q5VTL7 733 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 LIPJQ5W064 366 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 LACC1Q8IV20 430 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 PRR22Q8IZ63 422 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 FBF1Q8TES7 1133 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 GNRHR2Q96P88 292 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 GSX1Q9H4S2 264 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 DDX31Q9H8H2 851 aaKnown RBP16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 TEX10Q9NXF1 929 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 CAMK2AQ9UQM7 478 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 RNF11Q9Y3C5 154 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 TSC22D4Q9Y3Q8 395 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 NPFFR2Q9Y5X5 522 aa16.87■□□□□ 0.29
SSSCA1-206ENST00000531405 NSD1Q96L73 2696 aaPredicted RBP16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 ANKRD33BA6NCL7 494 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 FAM187AA6NFU0 413 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 H0YIV9 168 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 TP53I11O14683 189 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 GSTA2P09210 222 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 SLC35E2P0CK97 266 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 GFAPP14136 432 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 TIMP3P35625 211 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 CDK9P50750 372 aaKnown RBP16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 AGFG1P52594 562 aaKnown RBP16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 ARFIP1P53367 373 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 PHEXP78562 749 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 TOMM20Q15388 145 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 TBCELQ5QJ74 424 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 GOLGA7Q7Z5G4 137 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 SPPL2AQ8TCT8 520 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 FAM222BQ8WU58 562 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 PRDM14Q9GZV8 571 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 EPB41L4BQ9H329 900 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 UBQLN3Q9H347 655 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 WDR41Q9HAD4 459 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 CXorf21Q9HAI6 301 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 C15orf41Q9Y2V0 281 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 ACOT9Q9Y305 439 aa16.86■□□□□ 0.29
SSSCA1-206ENST00000531405 SYCE1LA8MT33 242 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 SIX3O95343 332 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 IL2RAP01589 272 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 HPNP05981 417 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 GALNSP34059 522 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms