RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 FEN1P39748 380 aaKnown RBP19.92■□□□□ 0.78
VPS28-212ENST00000530836 VHLP40337 213 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 PRIM2P49643 509 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 CDK9P50750 372 aaKnown RBP19.92■□□□□ 0.78
VPS28-212ENST00000530836 XKP51811 444 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 ARSFP54793 590 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 ITGA1P56199 1179 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 OLR1P78380 273 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 PRR5P85299 388 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 ADRM1Q16186 407 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 ARHGAP22Q7Z5H3 698 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 RNF130Q86XS8 419 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 PTOV1Q86YD1 416 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 ADGRG5Q8IZF4 528 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 CLEC4FQ8N1N0 589 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 PAPD5Q8NDF8 572 aaKnown RBP19.92■□□□□ 0.78
VPS28-212ENST00000530836 OR56A1Q8NGH5 318 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 OR5AK3PQ8NH89 298 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 CSF3RQ99062 836 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 C3orf14Q9HBI5 128 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 DCAF13Q9NV06 445 aaKnown RBP19.92■□□□□ 0.78
VPS28-212ENST00000530836 GPATCH2Q9NW75 528 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 CDC14AQ9UNH5 594 aa19.92■□□□□ 0.78
VPS28-212ENST00000530836 NUP214P35658 2090 aaPredicted RBP19.92■□□□□ 0.78
VPS28-212ENST00000530836 WASHC1A8K0Z3 465 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 H3BMH7 237 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 BMP10O95393 424 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 FHP07954 510 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 IFI6P09912 130 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 PORP16435 677 aaPredicted RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 SHC2P98077 582 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 ACY1Q03154 408 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 KCNAB1Q14722 419 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 ZNF630Q2M218 657 aaPredicted RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 INTS11Q5TA45 600 aaKnown RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 C6orf120Q7Z4R8 191 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 OR5T3Q8NGG3 340 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 SLCO4A1Q96BD0 722 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 LIN37Q96GY3 246 aaPredicted RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 SPRTNQ9H040 489 aaPredicted RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 YY1AP1Q9H869 796 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 CUTCQ9NTM9 273 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 ACSL6Q9UKU0 697 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 SAMD4AQ9UPU9 718 aaKnown RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 AURKCQ9UQB9 309 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 MAP4K5Q9Y4K4 846 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 NCOR2Q9Y618 2525 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 A8MU76 341 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 CASQ2O14958 399 aaPredicted RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 GPR75O95800 540 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 CAMK2BQ13554 666 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 FAM98BQ52LJ0 330 aaKnown RBP19.91■□□□□ 0.78
VPS28-212ENST00000530836 TBCELQ5QJ74 424 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 ZNF595Q8IYB9 648 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 RCBTB1Q8NDN9 531 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 NDC1Q9BTX1 674 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 RPS6KA6Q9UK32 745 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 MSRB2Q9Y3D2 182 aa19.91■□□□□ 0.78
VPS28-212ENST00000530836 CLDN4O14493 209 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 EMC8O43402 210 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 DNAJB6O75190 326 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 C8orf89P0DMQ9 161 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 ETFAP13804 333 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 CPMP14384 443 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 FOLR1P15328 257 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 DSTNP60981 165 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 ELOAQ14241 798 aaKnown RBP19.9■□□□□ 0.78
VPS28-212ENST00000530836 GPR19Q15760 415 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 COX20Q5RI15 118 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 RNF111Q6ZNA4 994 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 C7orf57Q8NEG2 295 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 MMABQ96EY8 250 aaPredicted RBP19.9■□□□□ 0.78
VPS28-212ENST00000530836 MAGIXQ9H6Y5 334 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 FGF21Q9NSA1 209 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 ZCCHC3Q9NUD5 404 aaKnown RBP19.9■□□□□ 0.78
VPS28-212ENST00000530836 ZNF451Q9Y4E5 1061 aa19.9■□□□□ 0.78
VPS28-212ENST00000530836 COL27A1Q8IZC6 1860 aaPredicted RBP19.9■□□□□ 0.78
VPS28-212ENST00000530836 SCN3AQ9NY46 2000 aa19.89■□□□□ 0.78
VPS28-212ENST00000530836 PLOD2O00469 737 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 C1QCP02747 245 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 ATP1B1P05026 303 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 KDELR2P33947 212 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 FOLH1Q04609 750 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 BIKQ13323 160 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 EIF3IQ13347 325 aaKnown RBP19.89■□□□□ 0.77
VPS28-212ENST00000530836 C16orf72Q14CZ0 275 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 CEACAM20Q6UY09 585 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 METTL25Q8N6Q8 603 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 OR1L3Q8NH93 324 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 TBC1D20Q96BZ9 403 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 ZNF501Q96CX3 271 aaPredicted RBP19.89■□□□□ 0.77
VPS28-212ENST00000530836 ELP4Q96EB1 424 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 RNF145Q96MT1 663 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 CMKLR1Q99788 373 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 NTMQ9P121 344 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 PTGFRNQ9P2B2 879 aa19.89■□□□□ 0.77
VPS28-212ENST00000530836 CCDC187A0A096LP49 1063 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 TMEM247A6NEH6 219 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 RAP2AP10114 183 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 GCGRP47871 477 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms