RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 LRRC58Q96CX6 371 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 ZNF764Q96H86 408 aaPredicted RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 CLPTM1LQ96KA5 538 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 LRFN5Q96NI6 719 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 DGAT2Q96PD7 388 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 CGREF1Q99674 301 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 CNPPD1Q9BV87 410 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 TRIM4Q9C037 500 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 CLK4Q9HAZ1 481 aaKnown RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 SIRT3Q9NTG7 399 aaPredicted RBP9.97□□□□□ -0.81
SOX6-213ENST00000530378 C14orf105Q9NVL8 296 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 TMEM45AQ9NWC5 275 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 TAS2R9Q9NYW1 312 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 TAS2R7Q9NYW3 318 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 BTNL2Q9UIR0 455 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 VPS4AQ9UN37 437 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 LAMA5O15230 3695 aa9.97□□□□□ -0.81
SOX6-213ENST00000530378 BAHCC1Q9P281 2608 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 IGLV3-12A0A075B6K2 115 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 LOC101059948A0A1B0GTJ6 334 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 DYTNA2CJ06 578 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 TRABD2BA6NFA1 517 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 GYG2O15488 501 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 ALOX12BO75342 701 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 PDE5AO76074 875 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 SORBS2O94875 1100 aaKnown RBP9.96□□□□□ -0.81
SOX6-213ENST00000530378 DDX5P17844 614 aaKnown RBP9.96□□□□□ -0.81
SOX6-213ENST00000530378 TNNI3P19429 210 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 F8A1P23610 371 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 MPIP34949 423 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 CHI3L1P36222 383 aaPredicted RBP9.96□□□□□ -0.81
SOX6-213ENST00000530378 DLSTP36957 453 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 FRKP42685 505 aaPredicted RBP9.96□□□□□ -0.81
SOX6-213ENST00000530378 SLC7A2P52569 658 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 EMP2P54851 167 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 PSME3P61289 254 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 PUM1Q14671 1186 aaKnown RBP eCLIP9.96□□□□□ -0.81
SOX6-213ENST00000530378 GLIPR1L2Q4G1C9 344 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 QSOX2Q6ZRP7 698 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 MSANTD1Q6ZTZ1 278 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 VASH2Q86V25 355 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 CACTIN-AS1Q8N1I8 211 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 C10orf111Q8N326 155 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 DPP10Q8N608 796 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 ESX1Q8N693 406 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 ZNF321PQ8N8H1 164 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 TSPEARQ8WU66 669 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 OR5P2Q8WZ92 322 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 FKBP10Q96AY3 582 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 NAF1Q96HR8 494 aaKnown RBP9.96□□□□□ -0.81
SOX6-213ENST00000530378 DPH2Q9BQC3 489 aaPredicted RBP9.96□□□□□ -0.81
SOX6-213ENST00000530378 SLC35A5Q9BS91 424 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 YIPF4Q9BSR8 244 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 SPRY4Q9C004 299 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 TAS2R1Q9NYW7 299 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 USP22Q9UPT9 525 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 MAN2B2Q9Y2E5 1009 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 PCDHGA7Q9Y5G6 932 aa9.96□□□□□ -0.81
SOX6-213ENST00000530378 CHD8Q9HCK8 2581 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 IGKV3D-11A0A0A0MRZ8 115 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 VSTM2BA6NLU5 285 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 CDRT15L2A8MXV6 281 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 C17orf105B2RV13 164 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 MASP2O00187 686 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 KLF7O75840 302 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 UMODP07911 640 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 KRT16P08779 473 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 HOXB9P17482 250 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 SSTR4P31391 388 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 OTX2P32243 289 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 MSX2P35548 267 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 FOLR3P41439 243 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 STAT5AP42229 794 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 STT3AP46977 705 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 MNAT1P51948 309 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 IGLV3-21P80748 117 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 SRSF6Q13247 344 aaKnown RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 ZNF267Q14586 743 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 CEBPEQ15744 281 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 TRMT12Q53H54 448 aaKnown RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 SFT2D3Q587I9 215 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 ZNF628Q5EBL2 1059 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 COQ5Q5HYK3 327 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.96□□□□□ -0.82
SOX6-213ENST00000530378 ZNF517Q6ZMY9 492 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 GALNT12Q8IXK2 581 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 ST13P4Q8IZP2 240 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 IL22RA1Q8N6P7 574 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 FAM156AQ8NDB6 213 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 METTL21AQ8WXB1 218 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 RIT1Q92963 219 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 FAM120BQ96EK7 910 aaKnown RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 RBM18Q96H35 190 aaKnown RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 TUBB6Q9BUF5 446 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 OR8D2Q9GZM6 311 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 TGIF2Q9GZN2 237 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 NEUROD4Q9HD90 331 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 ADAP2Q9NPF8 381 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 ACSS1Q9NUB1 689 aaPredicted RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 ZCCHC3Q9NUD5 404 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms