RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ARL13AQ5H913 290 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 CFAP157Q5JU67 520 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MANEAQ5SRI9 462 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 FRG2Q64ET8 278 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 COX15Q7KZN9 410 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 CUZD1Q86UP6 607 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MYLK4Q86YV6 388 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 NUDCD3Q8IVD9 361 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 DSELQ8IZU8 1212 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 TBC1D19Q8N5T2 526 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 CDYL2Q8N8U2 506 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 AMER3Q8N944 861 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 TTC29Q8NA56 475 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 HUS1BQ8NHY5 278 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 ZCCHC10Q8TBK6 192 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MGARPQ8TDB4 240 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 UTP15Q8TED0 518 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 N4BP2L2Q92802 583 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 ATP6V1E2Q96A05 226 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MS4A6EQ96DS6 147 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 CNDP1Q96KN2 507 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 QRFPRQ96P65 431 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 FRG2BQ96QU4 278 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 SORT1Q99523 831 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 ZNF717Q9BY31 904 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 C20orf27Q9GZN8 174 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 KLHL31Q9H511 634 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MID1IP1Q9NPA3 183 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MED4Q9NPJ6 270 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 LHX9Q9NQ69 397 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 FARSBQ9NSD9 589 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 NKIRAS1Q9NYS0 192 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 HAO1Q9UJM8 370 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 SLC22A7Q9Y694 548 aa8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 HELZ2Q9BYK8 2649 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 MDC1Q14676 2089 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 FASNP49327 2511 aaKnown RBP8.25□□□□□ -1.09
CCDC90B-217ENST00000530253 LRIT2A6NDA9 550 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 MAGEB17A8MXT2 336 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TMEM114B3SHH9 223 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TMEM233B4DJY2 109 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 FOXE1O00358 373 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 MANBAO00462 879 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TXNDC9O14530 226 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 GALR3O60755 368 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 CNOT3O75175 753 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 SNNO75324 88 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 LYPLA1O75608 230 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 NSA2O95478 260 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 HBQ1P09105 142 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 LIPCP11150 499 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 PCNAP12004 261 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 CHN1P15882 459 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 ALOX12P18054 663 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 IL1RNP18510 177 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 NR1D1P20393 614 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 EIF2S3P41091 472 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 RPS13P62277 151 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 RGS1Q08116 209 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 BST1Q10588 318 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 FAM53BQ14153 422 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 HIST2H2ACQ16777 129 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 MUM1Q2TAK8 710 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 FAM214AQ32MH5 1076 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 UGT3A2Q3SY77 523 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 NKAIN1Q4KMZ8 207 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TOR1AIP1Q5JTV8 583 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 C10orf62Q5T681 223 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 DEPDC1Q5TB30 811 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 HHATQ5VTY9 493 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 C1orf189Q5VU69 101 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 C1QL3Q5VWW1 255 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 KHDRBS2Q5VWX1 349 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 HIST2H2AA3Q6FI13 130 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 ABHD17CQ6PCB6 329 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 RNF165Q6ZSG1 346 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 NLGN4YQ8NFZ3 816 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 RAB3IL1Q8TBN0 382 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 METTL6Q8TCB7 284 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 CT55Q8WUE5 264 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 FGF11Q92914 225 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 REPS1Q96D71 796 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 MVB12AQ96EY5 273 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 ZNF764Q96H86 408 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 F2RL3Q96RI0 385 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 HBEGFQ99075 208 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 MTERF1Q99551 399 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 NDC1Q9BTX1 674 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 SHCBP1LQ9BZQ2 653 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TOR3AQ9H497 397 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TUBB1Q9H4B7 451 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 IRAK4Q9NWZ3 460 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 PSD3Q9NYI0 1048 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 TIMM22Q9Y584 194 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 BAHCC1Q9P281 2608 aa8.24□□□□□ -1.09
CCDC90B-217ENST00000530253 AHCTF1Q8WYP5 2266 aa8.23□□□□□ -1.09
CCDC90B-217ENST00000530253 SPTBP11277 2137 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms