RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LILRA2Q8N149 483 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 TTC29Q8NA56 475 aaPredicted RBP13.54□□□□□ -0.24
TTC39A-216ENST00000530004 OR9A4Q8NGU2 314 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 PSMA8Q8TAA3 256 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 SUN3Q8TAQ9 357 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 FAM110BQ8TC76 370 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 PMEPA1Q969W9 287 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 C10orf90Q96M02 699 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 PKP2Q99959 881 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 RAD21L1Q9H4I0 556 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 EPS8L2Q9H6S3 715 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 ARMC1Q9NVT9 282 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 MAP4K5Q9Y4K4 846 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 PCDHGA8Q9Y5G5 932 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 ZNF780BQ9Y6R6 833 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 A0A1W2PS29 197 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 HYKKA2RU49 373 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 ZNF749O43361 778 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 RDH16O75452 317 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 MED26O95402 600 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-216ENST00000530004 IL10P22301 178 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 VAC14Q08AM6 782 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 FOXC1Q12948 553 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 FADDQ13158 208 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 FAM214AQ32MH5 1076 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 DCAF12Q5T6F0 453 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 GARNL3Q5VVW2 1013 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 OR52E8Q6IFG1 317 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 CEACAM20Q6UY09 585 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 CA13Q8N1Q1 262 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 NEURL3Q96EH8 262 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 TAAR9Q96RI9 348 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 DDA1Q9BW61 102 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 NPLQ9BXD5 320 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-216ENST00000530004 CUTCQ9NTM9 273 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-216ENST00000530004 B3GALT1Q9Y5Z6 326 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SCN3AQ9NY46 2000 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 DCHS1Q96JQ0 3298 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 A0A0A6YYC8 382 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-216ENST00000530004 I3L1I5 382 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-216ENST00000530004 TIPRLO75663 272 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SCRG1O75711 98 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 MPIP34949 423 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 PTGER1P34995 402 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 ARSFP54793 590 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SHC2P98077 582 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 TRIP10Q15642 601 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 CEBPEQ15744 281 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 LPCAT4Q643R3 524 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SAXO2Q658L1 398 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SHISA5Q8N114 240 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 FBXO30Q8TB52 745 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 LRTOMTQ8WZ04 291 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 MAL2Q969L2 176 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 ZNF681Q96N22 645 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 ZPBPQ9BS86 351 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 NDC1Q9BTX1 674 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 ASPSCR1Q9BZE9 553 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SEMA3GQ9NS98 782 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 SRPK3Q9UPE1 567 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 PCDHGA3Q9Y5H0 932 aa13.53□□□□□ -0.24
TTC39A-216ENST00000530004 NUP214P35658 2090 aaPredicted RBP13.52□□□□□ -0.24
TTC39A-216ENST00000530004 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-216ENST00000530004 TPST1O60507 370 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 B4GALT2O60909 372 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 TNFRSF21O75509 655 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 SERPINA1P01009 418 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 PEX2P28328 305 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 CCT3P49368 545 aaKnown RBP13.52□□□□□ -0.25
TTC39A-216ENST00000530004 SKP1P63208 163 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 GABREP78334 506 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 CAMK2BQ13554 666 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 VEZF1Q14119 521 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 FAM53BQ14153 422 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 GCNT6Q5T4J0 391 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 YOD1Q5VVQ6 348 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-216ENST00000530004 RHBDD2Q6NTF9 364 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 SZRD1Q7Z422 152 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 C11orf65Q8NCR3 313 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 OR4K14Q8NGD5 310 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.25
TTC39A-216ENST00000530004 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
TTC39A-216ENST00000530004 DHCR7Q9UBM7 475 aaKnown RBP13.52□□□□□ -0.25
TTC39A-216ENST00000530004 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 KIF26BQ2KJY2 2108 aa13.52□□□□□ -0.25
TTC39A-216ENST00000530004 C9orf172C9J069 976 aa13.51□□□□□ -0.25
TTC39A-216ENST00000530004 FAM227AF5H4B4 570 aa13.51□□□□□ -0.25
TTC39A-216ENST00000530004 CYR61O00622 381 aa13.51□□□□□ -0.25
TTC39A-216ENST00000530004 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
TTC39A-216ENST00000530004 FOXS1O43638 330 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms