RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PCDHGA6Q9Y5G7 932 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 DYTNA2CJ06 578 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 A8MUA0 341 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RNASET2O00584 256 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 IFNA16P05015 189 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ATP1B1P05026 303 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CYC1P08574 325 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 LIFP15018 202 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MPIP34949 423 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SOX18P35713 384 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MANFP55145 182 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MGAT2Q10469 447 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MAPRE2Q15555 327 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MAPKAPK3Q16644 382 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ST3GAL2Q16842 350 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MSANTD1Q6ZTZ1 278 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 AMER2Q8N7J2 671 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ADCY4Q8NFM4 1077 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 OR9A2Q8NGT5 310 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RP9Q8TA86 221 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 METTL21AQ8WXB1 218 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 OR5P2Q8WZ92 322 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 GTF2H4Q92759 462 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 C8orf44Q96CB5 159 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ZBED6CLQ96FA7 236 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RBM18Q96H35 190 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NAF1Q96HR8 494 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CCDC115Q96NT0 180 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 DGAT2Q96PD7 388 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TRIM4Q9C037 500 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PNO1Q9NRX1 252 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SEMA3GQ9NS98 782 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 WDR70Q9NW82 654 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 BTNL2Q9UIR0 455 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KCND3Q9UK17 655 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NDUFAF1Q9Y375 327 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 HS3ST3B1Q9Y662 390 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 IGHV3-20A0A0C4DH32 117 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TMEM8BA6NDV4 472 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ANGPT2O15123 496 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 OR10H2O60403 315 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CBX6O95503 412 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CPSF4O95639 269 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CT62P0C5K7 136 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NT5EP21589 574 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MMP11P24347 488 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PRDX6P30041 224 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 EIF2S3P41091 472 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CDKN2CP42773 168 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CDK9P50750 372 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 OR4D2P58180 307 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 HBA1P69905 142 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 HSPB3Q12988 150 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 BIKQ13323 160 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 IL10RAQ13651 578 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MLC1Q15049 377 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SFT2D3Q587I9 215 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FAM111BQ6SJ93 734 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PPP1R32Q7Z5V6 425 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 VPS37AQ8NEZ2 397 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ZFP28Q8NHY6 868 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PTPMT1Q8WUK0 201 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KAT2AQ92830 837 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KIAA1143Q96AT1 154 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CMTM5Q96DZ9 223 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ITCHQ96J02 903 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NPAS2Q99743 824 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CXorf21Q9HAI6 301 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SLC6A13Q9NSD5 602 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SIRT3Q9NTG7 399 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SLAMF8Q9P0V8 285 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MAN2B2Q9Y2E5 1009 aa11.36□□□□□ -0.59
TRAF3IP2-211ENST00000528599 BOD1L1Q8NFC6 3051 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 LOC102723996A0A087X1L8 192 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 HRKO00198 91 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CREG1O75629 220 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 GSNP06396 782 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ABCB1P08183 1280 aaPredicted RBP11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KRT16P08779 473 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 WT1P19544 449 aaPredicted RBP11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PTPN6P29350 595 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 OTX2P32243 289 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CPA2P48052 419 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MRPS35P82673 323 aaKnown RBP11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 STX5Q13190 355 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SSPNQ14714 243 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ELAVL1Q15717 326 aaKnown RBP11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PRICKLE4Q2TBC4 344 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ZNF628Q5EBL2 1059 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 C6orf10Q5SRN2 563 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 REP15Q6BDI9 236 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KIRREL2Q6UWL6 708 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CPEB2Q7Z5Q1 589 aaKnown RBP11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SIMC1Q8NDZ2 872 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 OR4A15Q8NGL6 344 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PSMA8Q8TAA3 256 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RIT1Q92963 219 aa11.35□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RCN3Q96D15 328 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms