RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SLC22A7Q9Y694 548 aa13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 GOLGA4Q13439 2230 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-220ENST00000528402 OR5K3A6NET4 321 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 H0YGG7 62 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC1A7O00341 560 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 AXIN1O15169 862 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 CTSVO60911 334 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 ANGPTL1O95841 491 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 CSF2P04141 144 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 OR1E2P47887 323 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 MAPK10P53779 464 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 CDH12P55289 794 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 ARF3P61204 181 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 RPS26P62854 115 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 RPP38P78345 283 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 ROR2Q01974 943 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 HHEXQ03014 270 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 DYNC1I2Q13409 638 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 RAPSNQ13702 412 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 DUSP7Q16829 419 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 PROX2Q3B8N5 592 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 ATAD3BQ5T9A4 648 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 ANKRD34AQ69YU3 496 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 FAM180BQ6P0A1 224 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 LRRC25Q8N386 305 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 NUP43Q8NFH3 380 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 APOBEC4Q8WW27 367 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 RAB8BQ92930 207 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 UCN3Q969E3 161 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 FKBP10Q96AY3 582 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 NMD3Q96D46 503 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 C10orf90Q96M02 699 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 FEVQ99581 238 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 TREX2Q9BQ50 279 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 ORAI3Q9BRQ5 295 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 TMEM121BQ9BXQ6 578 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 CXorf21Q9HAI6 301 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 LTB4R2Q9NPC1 389 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 PTGFRNQ9P2B2 879 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 DAPP1Q9UN19 280 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC9A8Q9Y2E8 581 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 NAALAD2Q9Y3Q0 740 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 SNX11Q9Y5W9 270 aa13.92□□□□□ -0.18
ECHDC1-220ENST00000528402 GLOD5A6NK44 160 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 SYT5O00445 386 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 HMGN2P05204 90 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 CD38P28907 300 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 FEN1P39748 380 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 LIM2P55344 173 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 SKP1P63208 163 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 RACK1P63244 317 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 MAPK11Q15759 364 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 EXOC3L2Q2M3D2 409 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 CTU2Q2VPK5 515 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 MLIPQ5VWP3 458 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 TRIM73Q86UV7 250 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 CAMKK1Q8N5S9 505 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 SMYD1Q8NB12 490 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 FAM46DQ8NEK8 389 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 TANKQ92844 425 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 TMIGD2Q96BF3 282 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 DHRS1Q96LJ7 313 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 COL21A1Q96P44 957 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 TRNT1Q96Q11 434 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 NODALQ96S42 347 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 PINK1Q9BXM7 581 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 ACTRT3Q9BYD9 372 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 SERHL2Q9H4I8 314 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 ACAD8Q9UKU7 415 aa13.91□□□□□ -0.18
ECHDC1-220ENST00000528402 BLACEA4D250 179 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PRAMEF25A6NGN4 478 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 FAAHO00519 579 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 MPZL2O60487 215 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 SRPX2O60687 465 aaPredicted RBP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 NOL3O60936 208 aaKnown RBP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 TRMUO75648 421 aaKnown RBP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 STATHP02808 62 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 DCKP27707 260 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 GGT2P36268 569 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 POLR2IP36954 125 aaKnown RBP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PEX19P40855 299 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 FASLGP48023 281 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 XKP51811 444 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PRKAG1P54619 331 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 TMBIM6P55061 237 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PMS2P3Q13401 168 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 FZD5Q13467 585 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PUM1Q14671 1186 aaKnown RBP eCLIP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 RAB39AQ14964 217 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 ZCCHC12Q6PEW1 402 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC44A2Q8IWA5 706 aaPredicted RBP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 SPARTQ8N0X7 666 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC5A8Q8N695 610 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PMM1Q92871 262 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms