RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 HRGP04196 525 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 HPNP05981 417 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 FOSL1P15407 271 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ALOX15P16050 662 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 BMP7P18075 431 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 CD53P19397 219 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 DNASE1P24855 282 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 BSGP35613 385 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 PTGDSP41222 190 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 SSR2P43308 183 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 CDK9P50750 372 aaKnown RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ARL4CP56559 192 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 GPX6P59796 221 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 PPP2R2AP63151 447 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 POU4F1Q01851 419 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ZNF267Q14586 743 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 HSPB2Q16082 182 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 OR4C11Q6IEV9 310 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 CMC1Q7Z7K0 106 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 CXorf67Q86X51 503 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ST13P4Q8IZP2 240 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 TCAIMQ8N3R3 496 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ZCCHC7Q8N3Z6 543 aaKnown RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 HUS1BQ8NHY5 278 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 SLC22A8Q8TCC7 542 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 SPPL2AQ8TCT8 520 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 UBTD2Q8WUN7 234 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 EXT2Q93063 718 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ADIPOR1Q96A54 375 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 JSRP1Q96MG2 331 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 RBBP8Q99708 897 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 UGT2B28Q9BY64 529 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 DPH5Q9H2P9 285 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 COPS7AQ9UBW8 275 aa13.05□□□□□ -0.32
CPSF1-201ENST00000526271 BOKQ9UMX3 212 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-201ENST00000526271 ATRQ13535 2644 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 C15orf38-AP3S2A0A0A6YYH1 394 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 ANKRD33BA6NCL7 494 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 SYNDIG1LA6NDD5 238 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 AHRRA9YTQ3 701 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 UBXN8O00124 270 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 SLC35E2BP0CK96 405 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 EPXP11678 715 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 PCNAP12004 261 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 S1PR1P21453 382 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 GDF1P27539 372 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 NAGLUP54802 743 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 RPS13P62277 151 aaKnown RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 CAV1Q03135 178 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 RCN2Q14257 317 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 POU4F3Q15319 338 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 AP5B1Q2VPB7 878 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 TMEM198Q66K66 360 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 ZDHHC24Q6UX98 284 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 LRRC70Q7Z2Q7 622 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 GPR180Q86V85 440 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 PRIMA1Q86XR5 153 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 LACC1Q8IV20 430 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 ZNF615Q8N8J6 731 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 SLC44A1Q8WWI5 657 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 RILPQ96NA2 401 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 DOHHQ9BU89 302 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 ANGPTL4Q9BY76 406 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 ALG9Q9H6U8 611 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 CD274Q9NZQ7 290 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 CNIH4Q9P003 139 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 ZNF629Q9UEG4 869 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-201ENST00000526271 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 RTTNQ86VV8 2226 aa13.04□□□□□ -0.32
CPSF1-201ENST00000526271 TCRBV9S1A1TA0A576 114 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 FAM159BA6NKW6 160 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 DVL2O14641 736 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 PGRMC2O15173 223 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 GPR75O95800 540 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 AIFM1O95831 613 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 RAF1P04049 648 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 RHOXF2BP0C7M4 288 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 PTPN6P29350 595 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 CASP3P42574 277 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 DGKQP52824 942 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 PLIN5Q00G26 463 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 TGM3Q08188 693 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 CALCOCO2Q13137 446 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 LAPTM5Q13571 262 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 DDX39BQ13838 428 aaKnown RBP13.03□□□□□ -0.32
CPSF1-201ENST00000526271 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 WIPI1Q5MNZ9 446 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-201ENST00000526271 GRHL2Q6ISB3 625 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 MED27Q6P2C8 311 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms