RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 FAM120CQ9NX05 1096 aaKnown RBP17.45■□□□□ 0.38
PTPRK-218ENST00000525459 PKD1L2Q7Z442 2459 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 OR6C76A6NM76 312 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 IL6P05231 212 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 DRD4P21917 467 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF385BQ569K4 471 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 ANKRD26P1Q6NSI1 321 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 CCDC116Q8IYX3 515 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 APCDD1LQ8NCL9 501 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 OR7G1Q8NGA0 311 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 ELP5Q8TE02 316 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 PPWD1Q96BP3 646 aaKnown RBP17.44■□□□□ 0.38
PTPRK-218ENST00000525459 CTHRC1Q96CG8 243 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 MARK4Q96L34 752 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 AMDHD1Q96NU7 426 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 MAT2BQ9NZL9 334 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 CFL2Q9Y281 166 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 COPG1Q9Y678 874 aaKnown RBP17.44■□□□□ 0.38
PTPRK-218ENST00000525459 A0A087WV62 115 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 DYTNA2CJ06 578 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 RNASET2O00584 256 aaKnown RBP17.44■□□□□ 0.38
PTPRK-218ENST00000525459 DDAH2O95865 285 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 IGKV3-11P04433 115 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 NCF2P19878 526 aaPredicted RBP17.44■□□□□ 0.38
PTPRK-218ENST00000525459 ITGA3P26006 1051 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 S100A3P33764 101 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 GPR143P51810 404 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 PGDP52209 483 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 MANFP55145 182 aaKnown RBP17.44■□□□□ 0.38
PTPRK-218ENST00000525459 UFM1P61960 85 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 FUT7Q11130 342 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 CHAF1BQ13112 559 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 FAM174BQ3ZCQ3 159 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF628Q5EBL2 1059 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 MSANTD1Q6ZTZ1 278 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 NCLNQ969V3 563 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 CNPPD1Q9BV87 410 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 OR8D2Q9GZM6 311 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 FAM107BQ9H098 131 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 GLIPR2Q9H4G4 154 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 PTGFRNQ9P2B2 879 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 TEKT2Q9UIF3 430 aa17.44■□□□□ 0.38
PTPRK-218ENST00000525459 MYOCOSA0A1B0GUC4 107 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 A0A1W2PRB8 838 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 A0A1W2PS29 197 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 FAM234BA2RU67 622 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 SNX3O60493 162 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 CEACAM4O75871 244 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 LAMP1P11279 417 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF267Q14586 743 aaPredicted RBP17.43■□□□□ 0.38
PTPRK-218ENST00000525459 MYBPC3Q14896 1274 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF750Q32MQ0 723 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 PGS1Q32NB8 556 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 LGI4Q8N135 537 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 OR9A2Q8NGT5 310 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF721Q8TF20 911 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 CIDECQ96AQ7 238 aaPredicted RBP17.43■□□□□ 0.38
PTPRK-218ENST00000525459 SENP5Q96HI0 755 aaPredicted RBP17.43■□□□□ 0.38
PTPRK-218ENST00000525459 THOC3Q96J01 351 aaKnown RBP17.43■□□□□ 0.38
PTPRK-218ENST00000525459 ELAC2Q9BQ52 826 aaKnown RBP17.43■□□□□ 0.38
PTPRK-218ENST00000525459 ERVK-19Q9WJR5 959 aa17.43■□□□□ 0.38
PTPRK-218ENST00000525459 PCDHGA9Q9Y5G4 932 aaKnown RBP17.43■□□□□ 0.38
PTPRK-218ENST00000525459 PLOD2O00469 737 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 CDK2AP1O14519 115 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 PLOD3O60568 738 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 PRAMEF2O60811 474 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 COQ9O75208 318 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 ALPPP05187 535 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 PGRP06401 933 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 GPX3P22352 226 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 ADSLP30566 484 aaPredicted RBP17.42■□□□□ 0.38
PTPRK-218ENST00000525459 DUSP2Q05923 314 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 RCAN2Q14206 197 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 TBR1Q16650 682 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 MPEG1Q2M385 716 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 COL28A1Q2UY09 1125 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 SPANXN4Q5MJ08 99 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 FAM180BQ6P0A1 224 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 HSDL2Q6YN16 418 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 SLC5A8Q8N695 610 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 OR5P2Q8WZ92 322 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF385DQ9H6B1 395 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 SLAMF7Q9NQ25 335 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 GPR83Q9NYM4 423 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 ZNF639Q9UID6 485 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 TUBD1Q9UJT1 453 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 PCDHGB4Q9UN71 923 aa17.42■□□□□ 0.38
PTPRK-218ENST00000525459 PRSS51A0A1B0GVH4 220 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 MKRN2OSH3BPM6 223 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 SLC22A2O15244 555 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 GPC1P35052 558 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 POLR2JP52435 117 aaKnown RBP17.41■□□□□ 0.38
PTPRK-218ENST00000525459 NME5P56597 212 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 KCNK10P57789 538 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 Q0VFX4 171 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 HSPB3Q12988 150 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 PRSS53Q2L4Q9 553 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 CRB2Q5IJ48 1285 aa17.41■□□□□ 0.38
PTPRK-218ENST00000525459 H3F3CQ6NXT2 135 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms