RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PAGE4O60829 102 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 EIF5BO60841 1220 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 KHDRBS3O75525 346 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 CREG1O75629 220 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 RNASEH2AO75792 299 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 AP2A2O94973 939 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 C9P02748 559 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 RPLP0P05388 317 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 PLA2G4BP0C869 781 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 FAM200BP0CF97 657 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 DNAH10OSP0CZ25 163 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SLC2A3P11169 496 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 GAP43P17677 238 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 KLK2P20151 261 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 HRH2P25021 359 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 U2AF2P26368 475 aaKnown RBP eCLIP1.41□□□□□ -2.18
CD44-212ENST00000524922 PSMA5P28066 241 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 HTR1EP28566 365 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SHC1P29353 583 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 TRIM23P36406 574 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CA7P43166 264 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 RPL34P49207 117 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 LIG4P49917 911 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 VAMP7P51809 220 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CASP6P55212 293 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SLC8A3P57103 927 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 GEMIN4P57678 1058 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 GSDMDP57764 484 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 VAMP2P63027 116 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 RPP30P78346 268 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 RBPJQ06330 500 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CACNG1Q06432 222 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SPAG1Q07617 926 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 EIF4EBP2Q13542 120 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 ZNF805Q5CZA5 627 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 PIP5KL1Q5T9C9 394 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 LYPLAL1Q5VWZ2 237 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 KRT79Q5XKE5 535 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 JADE1Q6IE81 842 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 PWWP2BQ6NUJ5 590 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ZNF774Q6NX45 483 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 PACS1Q6VY07 963 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SH2D5Q6ZV89 423 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 NCCRP1Q6ZVX7 275 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 ERN2Q76MJ5 926 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 CHST9Q7L1S5 443 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SETD3Q86TU7 594 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 MARCH9Q86YJ5 346 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 PLD3Q8IV08 490 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ARHGAP12Q8IWW6 846 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 C12orf56Q8IXR9 622 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 FAM9BQ8IZU0 186 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 GCSAMQ8N6F7 178 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 BCORP1Q8N888 145 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SYT2Q8N9I0 419 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 DCAF4L2Q8NA75 395 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 OR2T6Q8NHC8 308 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 GRHL3Q8TE85 626 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SMPDL3BQ92485 455 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CCT6BQ92526 530 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SHC3Q92529 594 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 GTF3C6Q969F1 213 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SYAP1Q96A49 352 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 SNRNP40Q96DI7 357 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 ANKRD36BP1Q96IX9 119 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 MAELQ96JY0 434 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 BMFQ96LC9 184 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 FER1L6-AS2Q96M78 137 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 SERPINB11Q96P15 392 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ZNF300Q96RE9 604 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 KLF6Q99612 283 aaPredicted RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 CTRCQ99895 268 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ARPC5LQ9BPX5 153 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 TRIM51Q9BSJ1 452 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 FGFBP2Q9BYJ0 223 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 NACA2Q9H009 215 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 LSG1Q9H089 658 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 CXCL16Q9H2A7 254 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 PIGMQ9H3S5 423 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ZHX3Q9H4I2 956 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CYP3A43Q9HB55 503 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 EPB41L5Q9HCM4 733 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 PDE7BQ9NP56 450 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 FAM120CQ9NX05 1096 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 GPR83Q9NYM4 423 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CACNG4Q9UBN1 327 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 CNOT8Q9UFF9 292 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 PISDQ9UG56 409 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 OR14J1Q9UGF5 321 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 HAO1Q9UJM8 370 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 GTF3C4Q9UKN8 822 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 MKLN1Q9UL63 735 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 MFHAS1Q9Y4C4 1052 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 RPS6KL1Q9Y6S9 549 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 ANK3Q12955 4377 aaKnown RBP1.41□□□□□ -2.18
CD44-212ENST00000524922 RP1P56715 2156 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
CD44-212ENST00000524922 MYLKQ15746 1914 aa1.4□□□□□ -2.18
CD44-212ENST00000524922 SDK2Q58EX2 2172 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 NCOA6Q14686 2063 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms