RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 RNF111Q6ZNA4 994 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 SLC29A4Q7RTT9 530 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 LRRC25Q8N386 305 aaPredicted RBP11.63□□□□□ -0.55
CCNC-216ENST00000523961 CISD2Q8N5K1 135 aaKnown RBP11.63□□□□□ -0.55
CCNC-216ENST00000523961 TMEM156Q8N614 296 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 ZNF781Q8N8C0 355 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 MDS2Q8NDY4 140 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 NUBPLQ8TB37 319 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 RAB3IL1Q8TBN0 382 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 DOK4Q8TEW6 326 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 EXOSC8Q96B26 276 aaKnown RBP11.63□□□□□ -0.55
CCNC-216ENST00000523961 ZNF681Q96N22 645 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 SORT1Q99523 831 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 TRIM4Q9C037 500 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 C20orf27Q9GZN8 174 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 TRIM45Q9H8W5 580 aaPredicted RBP11.63□□□□□ -0.55
CCNC-216ENST00000523961 MIEF1Q9NQG6 463 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 SLC35C2Q9NQQ7 365 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 ANKRD10Q9NXR5 420 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 TAS2R7Q9NYW3 318 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 LRFN1Q9P244 771 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 HAO1Q9UJM8 370 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 ENTPD4Q9Y227 616 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 PCDHGB6Q9Y5F9 930 aa11.63□□□□□ -0.55
CCNC-216ENST00000523961 COPG1Q9Y678 874 aaKnown RBP11.63□□□□□ -0.55
CCNC-216ENST00000523961 ATP6AP2A0A1C7CYW4 349 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 TMEM200CA6NKL6 621 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 HMGB1P1B2RPK0 211 aaPredicted RBP11.62□□□□□ -0.55
CCNC-216ENST00000523961 WWP2O00308 870 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 PEX11AO75192 247 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 ATP6AP2O75787 350 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 OR2J2O76002 312 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 CT62P0C5K7 136 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 CD46P15529 392 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 ASMTP46597 345 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 SLC37A1P57057 533 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 MAP4K2Q12851 820 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 MPEG1Q2M385 716 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 TTMPQ5BVD1 217 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 ZNF766Q5HY98 468 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 ZNF468Q5VIY5 522 aaPredicted RBP11.62□□□□□ -0.55
CCNC-216ENST00000523961 TICAM1Q8IUC6 712 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 C9orf40Q8IXQ3 194 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 GPALPP1Q8IXQ4 340 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 VWA5B2Q8N398 1253 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 TMEM178AQ8NBL3 297 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 OR7G1Q8NGA0 311 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 TMEM125Q96AQ2 219 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 MIB2Q96AX9 1013 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 TUBGCP3Q96CW5 907 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 SNRNP40Q96DI7 357 aaKnown RBP11.62□□□□□ -0.55
CCNC-216ENST00000523961 C19orf60Q96EN9 201 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 C3orf30Q96M34 536 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 C5orf34Q96MH7 638 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 SIGLEC12Q96PQ1 595 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 BBS4Q96RK4 519 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 BRINP2Q9C0B6 783 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 ACBD3Q9H3P7 528 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 LIN28AQ9H9Z2 209 aaKnown RBP11.62□□□□□ -0.55
CCNC-216ENST00000523961 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
CCNC-216ENST00000523961 THAP1Q9NVV9 213 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 MAT2BQ9NZL9 334 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
CCNC-216ENST00000523961 NEURL1O76050 574 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 BCKDHAP12694 445 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 SDC1P18827 310 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 TACR1P25103 407 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 SSTR4P31391 388 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 MPIP34949 423 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 ST13P50502 369 aaKnown RBP11.61□□□□□ -0.55
CCNC-216ENST00000523961 FOXK1P85037 733 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 DUSP2Q05923 314 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 CEBPEQ15744 281 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 PDCD2Q16342 344 aaPredicted RBP11.61□□□□□ -0.55
CCNC-216ENST00000523961 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
CCNC-216ENST00000523961 C6orf136Q5SQH8 315 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 SPINK14Q6IE38 97 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 SLC25A25Q6KCM7 469 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 FAM180BQ6P0A1 224 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 FAM180AQ6UWF9 173 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 C16orf47Q6ZP98 133 aaPredicted RBP11.61□□□□□ -0.55
CCNC-216ENST00000523961 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 CYP4Z2PQ8N1L4 340 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 SLC22A8Q8TCC7 542 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 ZNF675Q8TD23 568 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 ASB15Q8WXK1 588 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 CTHRC1Q96CG8 243 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 ERP27Q96DN0 273 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
CCNC-216ENST00000523961 TSSK3Q96PN8 268 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 RASL10BQ96S79 203 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 OR10A5Q9H207 317 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 MANSC1Q9H8J5 431 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 AGPAT4Q9NRZ5 378 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 ASF1BQ9NVP2 202 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 EXO1Q9UQ84 846 aaKnown RBP11.61□□□□□ -0.55
CCNC-216ENST00000523961 ERVK-11Q9UQG0 969 aa11.61□□□□□ -0.55
CCNC-216ENST00000523961 CFL2Q9Y281 166 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms