RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	KCNK10	P57789	538 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	KCNAB2	Q13303	367 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	RAPSN	Q13702	412 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	SERTAD2	Q14140	314 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	NSDHL	Q15738	373 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	VPS26B	Q4G0F5	336 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	FAM91A1	Q658Y4	838 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	TMEM205	Q6UW68	189 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	PPP1R32	Q7Z5V6	425 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	ANKRD37	Q7Z713	158 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	SNX32	Q86XE0	403 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	CCDC116	Q8IYX3	515 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	LRRC25	Q8N386	305 aa	Predicted RBP	11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	SUN3	Q8TAQ9	357 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	PPWD1	Q96BP3	646 aa	Known RBP	11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	WBP1	Q96G27	269 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	OR52E6	Q96RD3	313 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	SEMA3G	Q9NS98	782 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	P4HTM	Q9NXG6	502 aa		11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.15	□□□□□ -0.62
PVT1-215	ENST00000522963	LOC100653049	A0A140TA62	436 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	PRSS51	A0A1B0GVH4	220 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963		A0A1W2PRB8	838 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	CCDC154	A6NI56	674 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963		A8MUA0	341 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	MKRN2OS	H3BPM6	223 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	RNASET2	O00584	256 aa	Known RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	CFLAR	O15519	480 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	KRT34	O76011	436 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	C6orf47	O95873	294 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	SNRPB2	P08579	225 aa	Known RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	MMP11	P24347	488 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	STT3A	P46977	705 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	NCBP2	P52298	156 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	2e-6	■□□□□ 9.7
PVT1-215	ENST00000522963	RRAD	P55042	308 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	PLIN5	Q00G26	463 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	NFATC3	Q12968	1075 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	TLR1	Q15399	786 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	TERF2	Q15554	542 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	LTB4R	Q15722	352 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ANXA8L1	Q5VT79	327 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	SLC2A7	Q6PXP3	512 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	DGAT2L6	Q6ZPD8	337 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	MSANTD1	Q6ZTZ1	278 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	TRPM8	Q7Z2W7	1104 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF551	Q7Z340	670 aa	Predicted RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ANKRD46	Q86W74	232 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	CLECL1	Q8IZS7	167 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	NATD1	Q8N6N6	113 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	POU5F2	Q8N7G0	328 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	DOK4	Q8TEW6	326 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	TSPEAR	Q8WU66	669 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	METTL21A	Q8WXB1	218 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	C8orf44	Q96CB5	159 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ABHD17A	Q96GS6	310 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	AMDHD1	Q96NU7	426 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	IP6K3	Q96PC2	410 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	DGAT2	Q96PD7	388 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	PNO1	Q9NRX1	252 aa	Known RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ARL8B	Q9NVJ2	186 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	FAM120C	Q9NX05	1096 aa	Known RBP	11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	ERVK-11	Q9UQG0	969 aa		11.14	□□□□□ -0.63
PVT1-215	ENST00000522963	DOCK10	Q96BY6	2186 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	PCSK5	Q92824	1860 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	COL6A6	A6NMZ7	2263 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	IGHV3-20	A0A0C4DH32	117 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963		A0A1W2PP18	115 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	DYTN	A2CJ06	578 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	FBP2	O00757	339 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	OR10H2	O60403	315 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	IGHE	P01854	428 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	IFNA16	P05015	189 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	ATP1B1	P05026	303 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	COX4I1	P13073	169 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	NT5E	P21589	574 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	PRDX6	P30041	224 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	MPI	P34949	423 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	SOX18	P35713	384 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	CDK9	P50750	372 aa	Known RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	MANF	P55145	182 aa	Known RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	OR4D2	P58180	307 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	EEF1A2	Q05639	463 aa	Known RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	HSPB3	Q12988	150 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	BIK	Q13323	160 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	CYLC2	Q14093	348 aa	Predicted RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	MLC1	Q15049	377 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	MAPRE2	Q15555	327 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	SFT2D3	Q587I9	215 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	PAGE3	Q5JUK9	113 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	RETREG3	Q86VR2	466 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	PTRH1	Q86Y79	214 aa	Known RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	LSM14A	Q8ND56	463 aa	Known RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	ADCY4	Q8NFM4	1077 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	OR9A2	Q8NGT5	310 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms