RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZNF621Q6ZSS3 439 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 OVCH1Q7RTY7 1134 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ZNF551Q7Z340 670 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-205ENST00000522240 SLC15A3Q8IY34 581 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ST13P4Q8IZP2 240 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ZNF675Q8TD23 568 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ZFP90Q8TF47 636 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 PMEPA1Q969W9 287 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 MOAP1Q96BY2 351 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 THTPAQ9BU02 230 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 RAD21L1Q9H4I0 556 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ALG2Q9H553 416 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 NANOGQ9H9S0 305 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 SLC6A13Q9NSD5 602 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 IFT80Q9P2H3 777 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-205ENST00000522240 CTSFQ9UBX1 484 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 NXT1Q9UKK6 140 aaKnown RBP12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ERVK-11Q9UQG0 969 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 L3MBTL1Q9Y468 752 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 CLDN16Q9Y5I7 305 aa12.25□□□□□ -0.45
CPNE3-205ENST00000522240 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.25□□□□□ -0.45
CPNE3-205ENST00000522240 ANKRD11Q6UB99 2663 aaPredicted RBP12.24□□□□□ -0.45
CPNE3-205ENST00000522240 ZZEF1O43149 2961 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 RNF103-CHMP3A0A140T963 221 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 A0A1W2PS29 197 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 VSTM2BA6NLU5 285 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 EVPLLA8MZ36 301 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 C9J4A7 227 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 PLOD2O00469 737 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 NME4O00746 187 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 STK17BO94768 372 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 GSNP06396 782 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 ABCB1P08183 1280 aaPredicted RBP12.24□□□□□ -0.45
CPNE3-205ENST00000522240 GALNSP34059 522 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 MAGEA8P43361 318 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 EEFSECP57772 596 aaKnown RBP12.24□□□□□ -0.45
CPNE3-205ENST00000522240 MTPNP58546 118 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 KCNJ2P63252 427 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 RHAGQ02094 409 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 OCA2Q04671 838 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 STX4Q12846 297 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 TARDBPQ13148 414 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPNE3-205ENST00000522240 SLC13A2Q13183 592 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 MAP7Q14244 749 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 KIF26BQ2KJY2 2108 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 ZNF750Q32MQ0 723 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 PIGGQ5H8A4 983 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 PGM2L1Q6PCE3 622 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 BHLHB9Q6PI77 547 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 FAM198BQ6UWH4 519 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 SHISA5Q8N114 240 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 STT3BQ8TCJ2 826 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 UTP4Q969X6 686 aaKnown RBP12.24□□□□□ -0.45
CPNE3-205ENST00000522240 CDRT15Q96T59 188 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 SLC35A5Q9BS91 424 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 YIPF2Q9BWQ6 316 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 EPS8L2Q9H6S3 715 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 WDR54Q9H977 334 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 TPT1P8Q9HAU6 139 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 CMTM6Q9NX76 183 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 ADA2Q9NZK5 511 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 NTMQ9P121 344 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 PTGFRNQ9P2B2 879 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 SATB2Q9UPW6 733 aa12.24□□□□□ -0.45
CPNE3-205ENST00000522240 A0A087WV62 115 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 PMS2P1A4D2B8 440 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 C9orf172C9J069 976 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 TGFBR3LH3BV60 316 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 CLIC1O00299 241 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 JRKO75564 520 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
CPNE3-205ENST00000522240 KRT75O95678 551 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 CD63P08962 238 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 ZGLP1P0C6A0 271 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 HSD17B1P14061 328 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 STT3AP46977 705 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 TXNL4AP83876 142 aaKnown RBP12.23□□□□□ -0.45
CPNE3-205ENST00000522240 PRR5P85299 388 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 ID2Q02363 134 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 FADDQ13158 208 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 ERV3-1Q14264 604 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 NKG7Q16617 165 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 SPDYE7PQ495Y7 208 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 MINDY4Q4G0A6 757 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 ZNF628Q5EBL2 1059 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 RABL3Q5HYI8 236 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 SAXO2Q658L1 398 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
CPNE3-205ENST00000522240 IGF2-ASQ6U949 168 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 OR4N5Q8IXE1 308 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 PLPP5Q8NEB5 264 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 OR56A1Q8NGH5 318 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 OR52N2Q8NGI0 321 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 OR9A2Q8NGT5 310 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 NEURL3Q96EH8 262 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 FAM120BQ96EK7 910 aaKnown RBP12.23□□□□□ -0.45
CPNE3-205ENST00000522240 AURKBQ96GD4 344 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms