RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 L7N2F9 121 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 HTR1AP08908 422 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 MAPK3P27361 379 aaPredicted RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 CD70P32970 193 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 GCGRP47871 477 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 MAD2L1BPQ15013 274 aaPredicted RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 DNM1P34Q6PK57 102 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ASCC1Q8N9N2 400 aaKnown RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ERVK13-1Q9NX77 482 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 MYO10Q9HD67 2058 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 GON4LQ3T8J9 2241 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 TRAV6A0A075B6T7 132 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 TCRBV5S2A0A599 114 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 C1orf226A1L170 272 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ANHXE9PGG2 379 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 LCKP06239 509 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 DRD2P14416 443 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 GADD45AP24522 165 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 CNR2P34972 360 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 HOXD12P35452 270 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 HK3P52790 923 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 POU6F2P78424 691 aaPredicted RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 VEZF1Q14119 521 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 RGNQ15493 299 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 SERPINA11Q86U17 422 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 NAGSQ8N159 534 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 OR2L3Q8NG85 312 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 RIT1Q92963 219 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 SLC6A15Q9H2J7 730 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 LRRN3Q9H3W5 708 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 TUBB1Q9H4B7 451 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ACTL8Q9H568 366 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 LTBP4Q8N2S1 1624 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 FXYD6-FXYD2A0A087WZ82 144 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 ATF4P18848 351 aaPredicted RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
SYNPO-205ENST00000522122 XKR7Q5GH72 579 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 PGBD5Q8N414 524 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 JAGN1Q8N5M9 183 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 CREB3L1Q96BA8 519 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 SLC39A13Q96H72 371 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM19Q96HH6 336 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 C11orf49Q9H6J7 331 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 STUB1Q9UNE7 303 aa13.18□□□□□ -0.3
SYNPO-205ENST00000522122 METTL21EPA6NDL7 271 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 TTC34A8MYJ7 566 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 E7EQ34 232 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 HOXB2P14652 356 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF20P17024 532 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SLC9A3P48764 834 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SUOXP51687 545 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 HYAL2Q12891 473 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 UAP1L1Q3KQV9 507 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 UGT3A2Q3SY77 523 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 INO80EQ8NBZ0 244 aaPredicted RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 OR7G3Q8NG95 312 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SORCS1Q8WY21 1168 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 GTF2H4Q92759 462 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 PDLIM5Q96HC4 596 aaKnown RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 BEX2Q9BXY8 128 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 BEX1Q9HBH7 125 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 A0A0U1RQS6 177 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 OR2AT4A6NND4 320 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 NOTOA8MTQ0 251 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 NUAK1O60285 661 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 GATBO75879 557 aaKnown RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 GRHL2Q6ISB3 625 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 ACBD7Q8N6N7 88 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 TRPV4Q9HBA0 871 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 MRPS17Q9Y2R5 130 aaKnown RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 ANKRD31Q8N7Z5 1873 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 KDM4BO94953 1096 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 RLN2P04090 185 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 MRPL3P09001 348 aaKnown RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 POLR2CP19387 275 aaPredicted RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 CTSOP43234 321 aaPredicted RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 KLHL26Q53HC5 615 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 RDH14Q9HBH5 336 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 TNFRSF12AQ9NP84 129 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 A0A1B0GVT2 93 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 KANTRA0A1W2PQU2 76 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF860A6NHJ4 632 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms