RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 C3AR1Q16581 482 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 ZNF791Q3KP31 576 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 CFAP157Q5JU67 520 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 TRABD2AQ86V40 505 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 SPPL2CQ8IUH8 684 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 CHERPQ8IWX8 916 aaKnown RBP16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 GALNT12Q8IXK2 581 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 SLC15A4Q8N697 577 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 ZNF615Q8N8J6 731 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 BANPQ8N9N5 519 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 GOLM1Q8NBJ4 401 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 OR2M7Q8NG81 312 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 SLC22A8Q8TCC7 542 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 CAVIN3Q969G5 261 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 C11orf24Q96F05 449 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 GAL3ST4Q96RP7 486 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 FAIM2Q9BWQ8 316 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 TNFRSF12AQ9NP84 129 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 HEY2Q9UBP5 337 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 SH3BGRL2Q9UJC5 107 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 PLLPQ9Y342 182 aa16.52■□□□□ 0.24
TRAPPC9-211ENST00000521700 GTF3C1Q12789 2109 aa16.52■□□□□ 0.23
TRAPPC9-211ENST00000521700 G3V3Y1 287 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 CCL21O00585 134 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 TFECO14948 347 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 HS6ST1O60243 411 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 PCDH7O60245 1069 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ERAL1O75616 437 aaKnown RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 S1PR1P21453 382 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 PTGER1P34995 402 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ALDH9A1P49189 494 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 DUSP2Q05923 314 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ACSM2AQ08AH3 577 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 MGAT2Q10469 447 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ERCC6LQ2NKX8 1250 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 SPIN4Q56A73 249 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 LIPMQ5VYY2 423 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ACSM2BQ68CK6 577 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 FAM180BQ6P0A1 224 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 BNC2Q6ZN30 1099 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 Q6ZPB1 254 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 MAMDC2Q7Z304 686 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 FGD2Q7Z6J4 655 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 C10orf107Q8IVU9 208 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 GHDCQ8N2G8 530 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 SHCBP1LQ9BZQ2 653 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ROPN1BQ9BZX4 212 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 ROPN1Q9HAT0 212 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 SIRT5Q9NXA8 310 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 LGALS13Q9UHV8 139 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 PSME2Q9UL46 239 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 DLGAP4Q9Y2H0 992 aa16.51■□□□□ 0.23
TRAPPC9-211ENST00000521700 C2orf92A0A1B0GVN3 265 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 GOLGA6L10A6NI86 522 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 ESPNB1AK53 854 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 H3BQF6 201 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 IL3P08700 152 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 CCL3P10147 92 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 CSNK2A2P19784 350 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 SOX18P35713 384 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 MAP4K2Q12851 820 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 PCLAFQ15004 111 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 PRICKLE4Q2TBC4 344 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 CMPK2Q5EBM0 449 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 FAM111BQ6SJ93 734 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 SRRM1Q8IYB3 904 aaKnown RBP16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 ZNF441Q8N8Z8 693 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 OR52N2Q8NGI0 321 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 C16orf78Q8WTQ4 265 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 KLHL29Q96CT2 875 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 SPACA9Q96E40 222 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 CNRIP1Q96F85 164 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 APOPT1Q96IL0 206 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 MAGED4Q96JG8 741 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 ZNF681Q96N22 645 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 GATA5Q9BWX5 397 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 OR10A5Q9H207 317 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 SH2D2AQ9NP31 389 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 MID2Q9UJV3 735 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 TINAGQ9UJW2 476 aa16.5■□□□□ 0.23
TRAPPC9-211ENST00000521700 GNG14A0A1W2PPG7 69 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 CRCPO75575 148 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 P04436 131 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 ATP1B1P05026 303 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 FBXO45P0C2W1 286 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 DRD2P14416 443 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 COL8A1P27658 744 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 TIA1P31483 386 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 NR0B1P51843 470 aaKnown RBP16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 CASP6P55212 293 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 SPDYAQ5MJ70 313 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 SLC22A10Q63ZE4 541 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 TRIM46Q7Z4K8 759 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 OR7G1Q8NGA0 311 aa16.49■□□□□ 0.23
TRAPPC9-211ENST00000521700 ADIPOR1Q96A54 375 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms