RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 MACROD2A1Z1Q3 448 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 FOXI3A8MTJ6 420 aaPredicted RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 DDX39AO00148 427 aaKnown RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 CHEK1O14757 476 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 SH2D1BO14796 132 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 MCF2LO15068 1137 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 VEGFDO43915 354 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 VENTXO95231 258 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 FCER2P06734 321 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 CCDC159P0C7I6 412 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 FAM200BP0CF97 657 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 HLA-DPA1P20036 260 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 MARCKSP29966 332 aaPredicted RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 HMGCLP35914 325 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 ELK3P41970 407 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 CNN1P51911 297 aaKnown RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 SLC7A2P52569 658 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 CBX3Q13185 183 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 KLF5Q13887 457 aaPredicted RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 SLC22A6Q4U2R8 563 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 CMPK2Q5EBM0 449 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 VWA2Q5GFL6 755 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 NKAIN2Q5VXU1 208 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 ASRGL1Q7L266 308 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 PEX5LQ8IYB4 626 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 BEST4Q8NFU0 473 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 OR6T1Q8NGN1 323 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 RDH11Q8TC12 318 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 AGAP11Q8TF27 550 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 DTD2Q96FN9 168 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 GPR137Q96N19 417 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 NAP1L3Q99457 506 aaPredicted RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 KCNMB3Q9NPA1 279 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 CUTCQ9NTM9 273 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 DHRS4-AS1Q9P1J3 65 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 RCOR3Q9P2K3 495 aaPredicted RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 SLC6A5Q9Y345 797 aa4.01□□□□□ -1.77
SKP1-208ENST00000521216 MRPS2Q9Y399 296 aaKnown RBP4.01□□□□□ -1.77
SKP1-208ENST00000521216 TRIM64A6NGJ6 449 aa4□□□□□ -1.77
SKP1-208ENST00000521216 TRIM64BA6NI03 449 aa4□□□□□ -1.77
SKP1-208ENST00000521216 BCL2L11O43521 198 aa4□□□□□ -1.77
SKP1-208ENST00000521216 TSPAN2O60636 221 aa4□□□□□ -1.77
SKP1-208ENST00000521216 SERPINF2P08697 491 aa4□□□□□ -1.77
SKP1-208ENST00000521216 DEKP35659 375 aaKnown RBP4□□□□□ -1.77
SKP1-208ENST00000521216 CSRP3P50461 194 aa4□□□□□ -1.77
SKP1-208ENST00000521216 ZNF131P52739 623 aa4□□□□□ -1.77
SKP1-208ENST00000521216 IST1P53990 364 aa4□□□□□ -1.77
SKP1-208ENST00000521216 SLC12A3P55017 1021 aa4□□□□□ -1.77
SKP1-208ENST00000521216 CCZ1BP86790 482 aa4□□□□□ -1.77
SKP1-208ENST00000521216 CCZ1P86791 482 aaPredicted RBP4□□□□□ -1.77
SKP1-208ENST00000521216 AP1B1Q10567 949 aa4□□□□□ -1.77
SKP1-208ENST00000521216 CARTPTQ16568 116 aa4□□□□□ -1.77
SKP1-208ENST00000521216 ANKRD55Q3KP44 614 aa4□□□□□ -1.77
SKP1-208ENST00000521216 WDR25Q64LD2 544 aaPredicted RBP4□□□□□ -1.77
SKP1-208ENST00000521216 HIST2H2AA3Q6FI13 130 aa4□□□□□ -1.77
SKP1-208ENST00000521216 ETFRF1Q6IPR1 90 aa4□□□□□ -1.77
SKP1-208ENST00000521216 LUZP1Q86V48 1076 aa4□□□□□ -1.77
SKP1-208ENST00000521216 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
SKP1-208ENST00000521216 MGARPQ8TDB4 240 aa4□□□□□ -1.77
SKP1-208ENST00000521216 EEF2KMTQ96G04 330 aa4□□□□□ -1.77
SKP1-208ENST00000521216 C1orf147Q96MC9 270 aaPredicted RBP4□□□□□ -1.77
SKP1-208ENST00000521216 TEX13AQ9BXU3 409 aaPredicted RBP4□□□□□ -1.77
SKP1-208ENST00000521216 DDX47Q9H0S4 455 aaKnown RBP4□□□□□ -1.77
SKP1-208ENST00000521216 TRPV6Q9H1D0 765 aa4□□□□□ -1.77
SKP1-208ENST00000521216 TMEM245Q9H330 911 aa4□□□□□ -1.77
SKP1-208ENST00000521216 Q9HAA7 133 aa4□□□□□ -1.77
SKP1-208ENST00000521216 ADGRL4Q9HBW9 690 aa4□□□□□ -1.77
SKP1-208ENST00000521216 ABCC13Q9NSE7 274 aa4□□□□□ -1.77
SKP1-208ENST00000521216 ZNF581Q9P0T4 197 aa4□□□□□ -1.77
SKP1-208ENST00000521216 FAM153AQ9UHL3 310 aa4□□□□□ -1.77
SKP1-208ENST00000521216 IKZF3Q9UKT9 509 aa4□□□□□ -1.77
SKP1-208ENST00000521216 SLC9A8Q9Y2E8 581 aa4□□□□□ -1.77
SKP1-208ENST00000521216 HCFC1P51610 2035 aa4□□□□□ -1.77
SKP1-208ENST00000521216 TRAV9-2A0A087WT02 112 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ZNF487B1APH4 448 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ZNF354AO60765 605 aaPredicted RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 IGHG3P01860 377 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ABHD2P08910 425 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 HIST1H2AGP0C0S8 130 aaPredicted RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 PTMSP20962 102 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 TRIM23P36406 574 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 RPL34P49207 117 aaKnown RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 NT5C2P49902 561 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 HNRNPFP52597 415 aaKnown RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 HMGCS2P54868 508 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 TRA2BP62995 288 aaKnown RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 TSTA3Q13630 321 aaPredicted RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 BTG3Q14201 252 aaPredicted RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 APOOLQ6UXV4 268 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 BNIPLQ7Z465 357 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.99□□□□□ -1.77
SKP1-208ENST00000521216 SPAG16Q8N0X2 631 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ZNF491Q8N8L2 437 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ZNF671Q8TAW3 534 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 HIST1H2ACQ93077 130 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 APOL2Q9BQE5 337 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ZNF446Q9NWS9 450 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 CYP39A1Q9NYL5 469 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 HMG20BQ9P0W2 317 aa3.99□□□□□ -1.77
SKP1-208ENST00000521216 ENTPD4Q9Y227 616 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms