RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF189O75820 626 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 PLEKHA8P1O95397 391 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SERPINB2P05120 415 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 YES1P07947 543 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM58BPP0C7Q3 252 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRIM49P0CI25 452 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRIM49CP0CI26 452 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 STAG3L1P0CL83 205 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 DESP17661 470 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCNE1P24864 410 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 GNA11P29992 359 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TIA1P31483 386 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TCF7P36402 384 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 GYG1P46976 350 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 GMPSP49915 693 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SERPINB8P50452 374 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 LBX1P52954 281 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 CSNK2BP67870 215 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 GSTO1P78417 241 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 MRPS25P82663 173 aaKnown RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 RBP5P82980 135 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 BFSP1Q12934 665 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SPCS2Q15005 226 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TAB1Q15750 504 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 LIN52Q52LA3 116 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 C14orf177Q52M58 125 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SMUG1Q53HV7 270 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 FGD3Q5JSP0 725 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCDC122Q5T0U0 273 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TXNRD3NBQ6F5E7 133 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 DCLRE1AQ6PJP8 1040 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 DHRS4L2Q6PKH6 230 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRSS55Q6UWB4 352 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 MSANTD1Q6ZTZ1 278 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 GPR141Q7Z602 305 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 IQCF2Q8IXL9 164 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 BBS5Q8N3I7 341 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRSS35Q8N3Z0 413 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 RNF10Q8N5U6 811 aaKnown RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SDR42E1Q8WUS8 393 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 HEXDCQ8WVB3 486 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 NELFBQ8WX92 580 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 DNAJC9Q8WXX5 260 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLCO2A1Q92959 643 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 CAPZA3Q96KX2 299 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 KLHL5Q96PQ7 755 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 MTMR9Q96QG7 549 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 CITED2Q99967 270 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 HOXD1Q9GZZ0 328 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 NACA2Q9H009 215 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 RIMS4Q9H426 269 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 ECT2Q9H8V3 914 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 RNF121Q9H920 327 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 RAVER2Q9HCJ3 691 aaKnown RBP2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAIMQ9NVQ4 179 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 NMRK1Q9NWW6 199 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 VPS54Q9P1Q0 977 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAD2L2Q9UI95 211 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 HYOU1Q9Y4L1 999 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRSS21Q9Y6M0 314 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 RNF215Q9Y6U7 377 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 ATP8B3O60423 1300 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 PCM1Q15154 2024 aa2.83□□□□□ -1.96
HMGB1P41-201ENST00000520234 TOGARAM1Q9Y4F4 1720 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 LAMB1P07942 1786 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 COL14A1Q05707 1796 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 XIRP1Q702N8 1843 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 DOCK2Q92608 1830 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRAV34A0A0B4J273 112 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 IGKV6D-41A0A0C4DH26 115 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRIM64BA6NI03 449 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TMEM110-MUSTN1A8MSY1 372 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 BTNL10A8MVZ5 291 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 KPNA7A9QM74 516 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 PSMA7O14818 248 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NVLO15381 856 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 FLRT2O43155 660 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 RAD51CO43502 376 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 DCXO43602 365 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CYTH3O43739 400 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGEC1O60732 1142 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRAF2O60831 178 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CEACAM4O75871 244 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 BBOX1O75936 387 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 FGFR1OPO95684 399 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 LYNP07948 512 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF883P0CG24 379 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 F3P13726 295 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CD59P13987 128 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CYP2A7P20853 494 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 AADACP22760 399 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ANXA13P27216 316 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 STIP1P31948 543 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 SOAT1P35610 550 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CYLC1P35663 651 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 OR3A2P47893 321 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ACADVLP49748 655 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CLK1P49759 484 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 HSPA2P54652 639 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGOHP61326 146 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms