RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 MKLN1Q9UL63 735 aa8□□□□□ -1.13
CTNNA1-210ENST00000518825 CFL2Q9Y281 166 aa8□□□□□ -1.13
CTNNA1-210ENST00000518825 YARS2Q9Y2Z4 477 aaKnown RBP8□□□□□ -1.13
CTNNA1-210ENST00000518825 DENND4AQ7Z401 1863 aa8□□□□□ -1.13
CTNNA1-210ENST00000518825 H1F0P07305 194 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SNRPNP63162 240 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TARDBPQ13148 414 aaKnown RBP eCLIP7.99□□□□□ -1.134e-6■■■■□ 19.5
CTNNA1-210ENST00000518825 NCF4Q15080 339 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 GPR19Q15760 415 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 HNRNPA1L2Q32P51 320 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 DCST1Q5T197 706 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 UTS2BQ765I0 119 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 REM2Q8IYK8 340 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ZNF557Q8N988 423 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TMIEQ8NEW7 156 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CREB3L4Q8TEY5 395 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TM9SF4Q92544 642 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 RAD51AP1Q96B01 352 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ZNF707Q96C28 371 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TMEM80Q96HE8 168 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SLC30A2Q9BRI3 323 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TSSK6Q9BXA6 273 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 NUAK2Q9H093 628 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 GLIPR2Q9H4G4 154 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SMURF1Q9HCE7 757 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CXXC1Q9P0U4 656 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TRAPPC4Q9Y296 219 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CARD8Q9Y2G2 431 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SLC27A6Q9Y2P4 619 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 KCNE3Q9Y6H6 103 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 GLOD5A6NK44 160 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 H3BN98 237 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 FAAHO00519 579 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 NME6O75414 186 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SEMA3DO95025 777 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 MED26O95402 600 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TIMP1P01033 207 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 PRNPP04156 253 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CHRM4P08173 479 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CLEC2LP0C7M8 214 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TNNI3P19429 210 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CD79BP40259 229 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 P2RY2P41231 377 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CCT3P49368 545 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 REEP5Q00765 189 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 HYAL2Q12891 473 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 MLF2Q15773 248 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ARHGAP15Q53QZ3 475 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SYT14P1Q58G82 188 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 LIPKQ5VXJ0 399 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SLC30A8Q8IWU4 369 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 OR52I1Q8NGK6 324 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 OR6T1Q8NGN1 323 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 KLHL6Q8WZ60 621 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ZCCHC2Q9C0B9 1178 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CRISPLD2Q9H0B8 497 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 QRSL1Q9H0R6 528 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 POLR2J3Q9H1A7 115 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TMEM245Q9H330 911 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 OR51I1Q9H343 314 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CTPS2Q9NRF8 586 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TVP23BQ9NYZ1 205 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 MGAT4BQ9UQ53 548 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CHST2Q9Y4C5 530 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 A0A0A6YYD5 115 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 HOXC11O43248 304 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TLX2O43763 284 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 LZTS3O60299 673 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SNRNP200O75643 2136 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SLITRK5O94991 958 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 APOL3O95236 402 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 RB1P06400 928 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 CHRM5P08912 532 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ALPPL2P10696 532 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 DDX5P17844 614 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 KELP23276 732 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SSTR4P31391 388 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 TMEM52BQ4KMG9 183 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 METRNLQ641Q3 311 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 DCUN1D3Q8IWE4 304 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 KRT78Q8N1N4 520 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 UBE2E3Q969T4 207 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ZG16BQ96DA0 208 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 OTUB2Q96DC9 234 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 AMDHD1Q96NU7 426 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 MIXL1Q9H2W2 232 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 ANKRA2Q9H9E1 313 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 C3orf14Q9HBI5 128 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SEMA3GQ9NS98 782 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 SNTG1Q9NSN8 517 aa7.99□□□□□ -1.13
CTNNA1-210ENST00000518825 A0A1W2PRQ8 180 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 HYKKA2RU49 373 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 C5orf58C9J3I9 102 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 ZNF670-ZNF695F2Z2N8 137 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 LOC110117498-PIK3R3F6TDL0 507 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 KIAA0355O15063 1070 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 LATO43561 262 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 DYRK3O43781 588 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 VEGFDO43915 354 aa7.98□□□□□ -1.13
CTNNA1-210ENST00000518825 PSPHP78330 225 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms