RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 AARDQ4LEZ3 155 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 LRRC23Q53EV4 343 aaPredicted RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 CATSPER3Q86XQ3 398 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 FAM184AQ8NB25 1140 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 CLEC1AQ8NC01 280 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 GMCL1P1Q8NEA9 526 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 OR52K1Q8NGK4 314 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 GPR148Q8TDV2 347 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 KRT35Q92764 455 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 BCL2L2Q92843 193 aaPredicted RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 NABP1Q96AH0 204 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 NRBF2Q96F24 287 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF597Q96LX8 424 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TMEM237Q96Q45 408 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 ERGIC2Q96RQ1 377 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 ATP6V0BQ99437 205 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 S1PR3Q99500 378 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TXN2Q99757 166 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TSPYL1Q9H0U9 437 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 JPT2Q9H910 190 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 AKIRIN1Q9H9L7 192 aaPredicted RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 LIN28AQ9H9Z2 209 aaKnown RBP2.97□□□□□ -1.93
VPS13B-207ENST00000518569 WDR41Q9HAD4 459 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 MID1IP1Q9NPA3 183 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TRPV5Q9NQA5 729 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 PLEK2Q9NYT0 353 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 IL20Q9NYY1 176 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 MAD2L2Q9UI95 211 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TSPAN16Q9UKR8 245 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 N6AMT1Q9Y5N5 214 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 TMEM94Q12767 1356 aa2.97□□□□□ -1.93
VPS13B-207ENST00000518569 FGD5Q6ZNL6 1462 aa2.96□□□□□ -1.93
VPS13B-207ENST00000518569 TTC21BQ7Z4L5 1316 aa2.96□□□□□ -1.93
VPS13B-207ENST00000518569 TRBV5-4A0A0C4DH59 114 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CTAGE15A4D2H0 777 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PDHXO00330 501 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 FBP2O00757 339 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CHUKO15111 745 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PEX11AO75192 247 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SLITRK3O94933 977 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CPNE6O95741 557 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 GAS8O95995 478 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 EPOP01588 193 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 S100A9P06702 114 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 HOXD4P09016 255 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PDHBP11177 359 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 GZMAP12544 262 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CPA3P15088 417 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CD1DP15813 335 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 GLRA1P23415 457 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 LMO2P25791 158 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CASP3P42574 277 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 ATP5OP48047 213 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 KIAA1024LP59773 190 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 LMO4P61968 165 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 ACTN3Q08043 901 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 TEFQ10587 303 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 FASTKQ14296 549 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 MXD4Q14582 209 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 LASP1Q14847 261 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 STK11Q15831 433 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 KRT71Q3SY84 523 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 POM121L1PQ3SYA9 428 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 C1orf189Q5VU69 101 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PRAMEF8Q5VWM4 474 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 TTC19Q6DKK2 380 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CAPN13Q6MZZ7 669 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 TMEM270Q6UE05 265 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 ZNF841Q6ZN19 808 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 TMUB2Q71RG4 321 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CCDC80Q76M96 950 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PRSS42Q7Z5A4 293 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CTAGE6Q86UF2 777 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SLC47A2Q86VL8 602 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 KCNMB4Q86W47 210 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 POM121L12Q8N7R1 296 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 C4orf32Q8N8J7 132 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SPERTQ8NA61 448 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 SIDT2Q8NBJ9 832 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CSNK1G2-AS1Q8NCQ2 148 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 TRPV3Q8NET8 790 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 OR1B1Q8NGR6 318 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 OR2L2Q8NH16 312 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 GOLGA5Q8TBA6 731 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PCNPQ8WW12 178 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PRCCQ92733 491 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 ANKRD9Q96BM1 317 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 DHTKD1Q96HY7 919 aaPredicted RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 CNOT6LQ96LI5 555 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 FOXN4Q96NZ1 517 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 RBM14Q96PK6 669 aaKnown RBP2.96□□□□□ -1.94
VPS13B-207ENST00000518569 TAAR6Q96RI8 345 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 GAL3ST1Q99999 423 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 RAB11FIP5Q9BXF6 653 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 ABCG8Q9H221 673 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 MARCH7Q9H992 704 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 PLEKHA3Q9HB20 300 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 FANCEQ9HB96 536 aa2.96□□□□□ -1.94
VPS13B-207ENST00000518569 DEPPQ9NTK1 212 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms