RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 MAGED4Q96JG8 741 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 SIGLEC12Q96PQ1 595 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 LRRC37BQ96QE4 947 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 KLHL1Q9NR64 748 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 ADAM29Q9UKF5 820 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 ZNF835Q9Y2P0 537 aa16.96■□□□□ 0.31
TFF3-204ENST00000518498 OR2W5A6NFC9 320 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 CD46P15529 392 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 XCR1P46094 333 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 GSTM5P46439 218 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 SKP1P63208 163 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 ACTN3Q08043 901 aaPredicted RBP16.95■□□□□ 0.3
TFF3-204ENST00000518498 RPS6KA2Q15349 733 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 EXT1Q16394 746 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 TOR1AIP1Q5JTV8 583 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 GALNT18Q6P9A2 607 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 ABHD13Q7L211 337 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 PRSS41Q7RTY9 318 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 RNF175Q8N4F7 328 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 MDS2Q8NDY4 140 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 GPR137Q96N19 417 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 KCNC2Q96PR1 638 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 MACROD1Q9BQ69 325 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 TBCDQ9BTW9 1192 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 ANKRD10Q9NXR5 420 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 HCN3Q9P1Z3 774 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 TINAGQ9UJW2 476 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 ITGB1BP2Q9UKP3 347 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 MAPRE3Q9UPY8 281 aa16.95■□□□□ 0.3
TFF3-204ENST00000518498 SCN3AQ9NY46 2000 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 PDZD2O15018 2839 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 NPIPA5E9PKD4 350 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 SGK494L7N484 410 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 SLC22A2O15244 555 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 RRP9O43818 475 aaKnown RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 ETHE1O95571 254 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 MRPL19P49406 292 aaKnown RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 TBL3Q12788 808 aaKnown RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 SQLEQ14534 574 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 KIAA0040Q15053 153 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 OR1C1Q15619 314 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 RFTN2Q52LD8 501 aaPredicted RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 SPINK14Q6IE38 97 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 TMEM214Q6NUQ4 689 aaKnown RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 Q6ZPB1 254 aaPredicted RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 NUDT13Q86X67 352 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 ZNF295-AS1Q8N0V1 137 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 SHISA5Q8N114 240 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 C1orf52Q8N6N3 182 aaKnown RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 HORMAD2Q8N7B1 307 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 MS4A6EQ96DS6 147 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 SCMH1Q96GD3 660 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 APIPQ96GX9 242 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 FCRL1Q96LA6 429 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 F2RL3Q96RI0 385 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 MRPL1Q9BYD6 325 aaKnown RBP16.94■□□□□ 0.3
TFF3-204ENST00000518498 TRIM8Q9BZR9 551 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 ANKHQ9HCJ1 492 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 MMP25Q9NPA2 562 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 TMEM45AQ9NWC5 275 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 MCM8Q9UJA3 840 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 NPIPA1Q9UND3 350 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 OTOGQ6ZRI0 2925 aa16.94■□□□□ 0.3
TFF3-204ENST00000518498 TEP1Q99973 2627 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 ERI3O43414 337 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 CLDN14O95500 239 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 TBX6O95947 436 aaPredicted RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 IL1RNP18510 177 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 TIA1P31483 386 aaKnown RBP eCLIP16.93■□□□□ 0.3
TFF3-204ENST00000518498 HNRNPH1P31943 449 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 ST13P50502 369 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 OC90Q02509 493 aaPredicted RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 HYAL2Q12891 473 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 HERC3Q15034 1050 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 NSDHLQ15738 373 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 IL23RQ5VWK5 629 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 OR4C11Q6IEV9 310 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 NOXRED1Q6NXP6 359 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 COMMD6Q7Z4G1 85 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 MTDHQ86UE4 582 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 CPSF7Q8N684 471 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 TMEM178AQ8NBL3 297 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 FAM98AQ8NCA5 519 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 PLPP5Q8NEB5 264 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 HES7Q9BYE0 225 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 TSPAN10Q9H1Z9 355 aaPredicted RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 COPS7BQ9H9Q2 264 aaPredicted RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 SAR1AQ9NR31 198 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 AIG1Q9NVV5 245 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 GIMAP2Q9UG22 337 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 WBP11Q9Y2W2 641 aaKnown RBP16.93■□□□□ 0.3
TFF3-204ENST00000518498 MEMO1Q9Y316 297 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 SLC22A7Q9Y694 548 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 CSMD1Q96PZ7 3565 aa16.93■□□□□ 0.3
TFF3-204ENST00000518498 ASPDHA6ND91 283 aa16.92■□□□□ 0.3
TFF3-204ENST00000518498 PLPP1O14494 284 aa16.92■□□□□ 0.3
TFF3-204ENST00000518498 FCHO1O14526 889 aa16.92■□□□□ 0.3
TFF3-204ENST00000518498 ASNA1O43681 348 aa16.92■□□□□ 0.3
TFF3-204ENST00000518498 PCDH7O60245 1069 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms