RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 LCA5LO95447 670 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 CNPP09543 421 aaKnown RBP-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 ALPIP09923 528 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 GABRA5P31644 462 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 POU3F4P49335 361 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 GDI2P50395 445 aaKnown RBP-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 SMARCB1Q12824 385 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 IKQ13123 557 aaPredicted RBP-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 PRDX4Q13162 271 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 PLD1Q13393 1074 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 STARD3Q14849 445 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 CXCL17Q6UXB2 119 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 TEX26Q8N6G2 289 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 ZNF563Q8TA94 476 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 ANKRD49Q8WVL7 239 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 RNF145Q96MT1 663 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 GAD1Q99259 594 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 COQ7Q99807 217 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 SULT4A1Q9BR01 284 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 DHX35Q9H5Z1 703 aaKnown RBP-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 NARFLQ9H6Q4 476 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 TAS2R14Q9NYV8 317 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 SLC2A6Q9UGQ3 507 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 IL36AQ9UHA7 158 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 SIGLEC7Q9Y286 467 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 DOCK6Q96HP0 2047 aa-1.78□□□□□ -2.69
RNU6-539P-201ENST00000516665 PRR14LQ5THK1 2151 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PI4KAP2A4QPH2 592 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 RNF212BA8MTL3 300 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PSMD3O43242 534 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 EPB41L2O43491 1005 aaKnown RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 CCDC22O60826 627 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF254O75437 659 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 CREG1O75629 220 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 CCNKO75909 580 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 GNAO1P09471 354 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR2T7P0C7T2 308 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 FOLR1P15328 257 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PGAM1P18669 254 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 ID1P41134 155 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR1D4P47884 311 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 EMP2P54851 167 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 BACE1P56817 501 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 CDC20Q12834 499 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 FAM98BQ52LJ0 330 aaKnown RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 WDR45BQ5MNZ6 344 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 RARS2Q5T160 578 aaKnown RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 TMEM136Q6ZRR5 245 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 C19orf35Q6ZS72 473 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 FRA10AC1Q70Z53 315 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 GRINAQ7Z429 371 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PPP1R27Q86WC6 154 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PGAM4Q8N0Y7 254 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 CNNM3Q8NE01 707 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 OR2T33Q8NG76 320 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 UBTD2Q8WUN7 234 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 HGDQ93099 445 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 NSUN4Q96CB9 384 aaKnown RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 TMEM41AQ96HV5 264 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 CCNL2Q96S94 520 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 TSSK1BQ9BXA7 367 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PPIL3Q9H2H8 161 aaKnown RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PRKRIP1Q9H875 184 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 SCPEP1Q9HB40 452 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 PLAC8Q9NZF1 115 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 ZNF222Q9UK12 451 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 RPH3AQ9Y2J0 694 aaPredicted RBP-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 RYR3Q15413 4870 aa-1.79□□□□□ -2.7
RNU6-539P-201ENST00000516665 IGHV3OR16-8A0A075B7F1 116 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 A0A1W2PQF6 199 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 A0A1W2PRG0 241 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 YDJCA8MPS7 323 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 VSTM5A8MXK1 200 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 NEDD8-MDP1E9PL57 170 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 HCRTR2O43614 444 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 FAM189A1O60320 539 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 PAGE4O60829 102 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 ALDH1L1O75891 902 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 VAMP5O95183 116 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 MOSP00540 346 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 IL4P05112 153 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 U2AF1L5P0DN76 240 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 CD59P13987 128 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 ALDH3B2P48448 385 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 ALDH3A2P51648 485 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 ACTR2P61160 394 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 PITPNAQ00169 270 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 U2AF1Q01081 240 aaKnown RBP eCLIP-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 CEBPZQ03701 1054 aaKnown RBP-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 LCP2Q13094 533 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 PSG5Q15238 335 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 NFIL3Q16649 462 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 KLF17Q5JT82 389 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 ACER2Q5QJU3 275 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 MARCH8Q5T0T0 291 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 WDR59Q6PJI9 974 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 GSTA5Q7RTV2 222 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 C6orf120Q7Z4R8 191 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 MOGAT3Q86VF5 341 aa-1.8□□□□□ -2.7
RNU6-539P-201ENST00000516665 DZIP1Q86YF9 867 aaKnown RBP-1.8□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms