RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 KIR2DS5A0A0G2JLQ3 304 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRBV11-1A0A0K0K1C0 115 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0U1RRA0 63 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1B0GUH1 482 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRSS51A0A1B0GVH4 220 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ATP6AP2A0A1C7CYW4 349 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PPK0 400 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PPV4 95 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PRB8 838 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCRBV5S1A1TA0A578 114 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FEZF1A0PJY2 475 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM89A2RUT3 159 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC162PA2VCL2 907 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR2M5A3KFT3 312 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTMR11A4FU01 709 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGEF35A5YM69 484 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF222A6NCQ9 220 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 METTL21EPA6NDL7 271 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CXorf65A6NEN9 183 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASB14A6NK59 587 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNTNA6NMZ2 147 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 YJEFN3A6XGL0 299 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 WASHC1A8K0Z3 465 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GABRR3A8MPY1 467 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 IQCF5A8MTL0 148 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C12orf71A8MTZ7 269 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPINE3A8MV23 424 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMCO5BA8MYB1 307 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM90A26D6RGX4 464 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRSS46E5RG02 174 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPIPA2E9PIF3 369 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPIPA7E9PJI5 369 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 F8VVB4 439 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 F8VWA3 439 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 H0YIG0 161 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 H3BTX0 84 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 I6L893 689 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIR2DS3K7RE56 304 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PDLIM1O00151 329 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RHODO00212 210 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 BTN3A3O00478 584 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NR5A2O00482 541 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SDHDO14521 159 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCSO14618 274 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ABCD4O14678 606 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNFRSF13BO14836 293 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MGST3O14880 152 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLF11O14901 512 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHUKO15111 745 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC22A2O15244 555 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RS1O15537 224 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSPA12AO43301 675 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZSCAN12O43309 604 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 AKR7A2O43488 359 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF13O43567 381 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SYT7O43581 403 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPRY3O43610 288 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 BUB3O43684 328 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLPP2O43688 288 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SULT1B1O43704 296 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TLX3O43711 291 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ITM2AO43736 263 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR1F1O43749 312 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DUX1O43812 170 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC28A2O43868 658 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TIMM8AO60220 97 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR10H2O60403 315 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DFNA5O60443 496 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR137BO60478 399 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNX3O60493 162 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TSPAN2O60636 221 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 UGDHO60701 494 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TPST2O60704 377 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 HCN1O60741 890 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRP3O75074 770 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNAJB6O75190 326 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GLRA3O75311 464 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SAP30O75446 220 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 UPK3AO75631 287 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CBR3O75828 277 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CABYRO75952 493 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLPXO76031 633 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NEURL1O76050 574 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TM7SF2O76062 418 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 STK17BO94768 372 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RGS11O94810 467 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NOL4O94818 638 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MYO1DO94832 1006 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SORBS2O94875 1100 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDK14O94921 469 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR2F2O95006 317 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NDUFB8O95169 186 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 BMP10O95393 424 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 AHSA1O95433 338 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 H6PDO95479 791 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TSPAN12O95859 305 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDPCPO95876 746 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TXNDC12O95881 172 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ECDO95905 644 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLPTM1O96005 669 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms