RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 PORP16435 677 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 KRT15P19012 456 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 TSPAN8P19075 237 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 HSD17B3P37058 310 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 KRT6CP48668 564 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 NR0B1P51843 470 aaKnown RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 RPP38P78345 283 aaKnown RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 CLCQ05315 142 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 PMPCAQ10713 525 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 EBPQ15125 230 aaKnown RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 RASA2Q15283 850 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 HYAL4Q2M3T9 481 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 WLSQ5T9L3 541 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 PRAMEF20Q5VT98 475 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF585AQ6P3V2 769 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 RPS27LQ71UM5 84 aaKnown RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 TRILQ7L0X0 811 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 COMMD6Q7Z4G1 85 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 FBXW8Q8N3Y1 598 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 OR5M9Q8NGP3 310 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 UCN3Q969E3 161 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 TP53INP1Q96A56 240 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 TRIM44Q96DX7 344 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-215ENST00000515516 C1QTNF3Q9BXJ4 246 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 OR10A5Q9H207 317 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 ZFP64Q9NPA5 681 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 B4GALT7Q9UBV7 327 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 ACAD8Q9UKU7 415 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
TCOF1-215ENST00000515516 TRGV5A0A0B4J1U4 118 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 CCDC151A5D8V7 595 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 AQP7O14520 342 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 SUSD5O60279 629 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 HCN1O60741 890 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 ESRRBO95718 433 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 IGHG3P01860 377 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 RHOXF2BP0C7M4 288 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 CPMP14384 443 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 ATP5F1P24539 256 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-215ENST00000515516 HMOX2P30519 316 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 CHRNB4P30926 498 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 SSTR4P31391 388 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
TCOF1-215ENST00000515516 FOXO1Q12778 655 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 TBCELQ5QJ74 424 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF678Q5SXM1 525 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 TMEM198Q66K66 360 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 LETMD1Q6P1Q0 360 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 GPRIN3Q6ZVF9 776 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 SLC22A9Q8IVM8 553 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 LIX1Q8N485 282 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 CDYL2Q8N8U2 506 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 OR10Q1Q8NGQ4 319 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 ACMSDQ8TDX5 336 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 DIO2Q92813 273 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 RHOXF2Q9BQY4 288 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 DOHHQ9BU89 302 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 BRINP2Q9C0B6 783 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 SH2D2AQ9NP31 389 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 FARSBQ9NSD9 589 aaKnown RBP12.59□□□□□ -0.39
TCOF1-215ENST00000515516 PNPLA3Q9NST1 481 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 TMEM216Q9P0N5 145 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 PSMC3IPQ9P2W1 217 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-215ENST00000515516 VPS29Q9UBQ0 182 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 CFL2Q9Y281 166 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 PCDHA9Q9Y5H5 950 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF780BQ9Y6R6 833 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 TEX15Q9BXT5 2789 aa12.59□□□□□ -0.39
TCOF1-215ENST00000515516 A0A1B0GVC2 190 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 C19orf84I3L1E1 186 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 PPP6CO00743 305 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 ULK1O75385 1050 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 ERAL1O75616 437 aaKnown RBP12.58□□□□□ -0.4
TCOF1-215ENST00000515516 OR4F21O95013 312 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 GSTA1P08263 222 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 SBK3P0C264 359 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 HSD3B1P14060 373 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-215ENST00000515516 IMPDH1P20839 514 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 HSD3B2P26439 372 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 ACVR2AP27037 513 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 SSTR2P30874 369 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 KIR3DL1P43629 444 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 ALDH9A1P49189 494 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 TRA2BP62995 288 aaKnown RBP12.58□□□□□ -0.4
TCOF1-215ENST00000515516 FUT7Q11130 342 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 CDSNQ15517 529 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 NTRK2Q16620 822 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 UNC50Q53HI1 259 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 SLC48A1Q6P1K1 146 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 LYPD8Q6UX82 237 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 TMEM151AQ8N4L1 468 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 C1orf52Q8N6N3 182 aaKnown RBP12.58□□□□□ -0.4
TCOF1-215ENST00000515516 LILRB4Q8NHJ6 448 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 METTL6Q8TCB7 284 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms