RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RBPJQ06330 500 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF763Q0D2J5 394 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 MAP4K2Q12851 820 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 EBPQ15125 230 aaKnown RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 C4orf17Q53FE4 359 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 TNFAIP8L3Q5GJ75 292 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 FAM219BQ5XKK7 198 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 GFRALQ6UXV0 394 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 BNC2Q6ZN30 1099 aaPredicted RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 RTL4Q6ZR62 310 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 SIAH3Q8IW03 269 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 VWA5B2Q8N398 1253 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ZFP62Q8NB50 900 aaPredicted RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 SSC4DQ8WTU2 575 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 UCN3Q969E3 161 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 TP53INP1Q96A56 240 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 KLHL29Q96CT2 875 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ERP27Q96DN0 273 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 GPR137Q96N19 417 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 WWTR1Q9GZV5 400 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 EML4Q9HC35 981 aaKnown RBP11.83□□□□□ -0.52
CLCN3-210ENST00000515420 TNFRSF12AQ9NP84 129 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 SEC14L3Q9UDX4 400 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 CFL2Q9Y281 166 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 DLGAP4Q9Y2H0 992 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ACTL7BQ9Y614 415 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF780BQ9Y6R6 833 aa11.83□□□□□ -0.52
CLCN3-210ENST00000515420 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 A0A1W2PS29 197 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 WIPF3A6NGB9 483 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 SLC28A1O00337 649 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 PEX1O43933 1283 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 SEMA7AO75326 666 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 SPAG7O75391 227 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ERLIN1O75477 346 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ERAL1O75616 437 aaKnown RBP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 NADKO95544 446 aaPredicted RBP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 IL3P08700 152 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ANXA4P09525 319 aaPredicted RBP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ETV4P43268 484 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 MEOX1P50221 254 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 CEBPEQ15744 281 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 PRICKLE4Q2TBC4 344 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 SPDYAQ5MJ70 313 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 KANK2Q63ZY3 851 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 IL20RBQ6UXL0 311 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 LRIG3Q6UXM1 1119 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 C16orf47Q6ZP98 133 aaPredicted RBP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 IKBIPQ70UQ0 350 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 MDGA2Q7Z553 956 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 SULF2Q8IWU5 870 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 TAGAPQ8N103 731 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF615Q8N8J6 731 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF441Q8N8Z8 693 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 C16orf52Q8NHV5 167 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF675Q8TD23 568 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 C16orf78Q8WTQ4 265 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 CTHRC1Q96CG8 243 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 PGM2Q96G03 612 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF681Q96N22 645 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
CLCN3-210ENST00000515420 MYNNQ9NPC7 610 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 TAS2R7Q9NYW3 318 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 HEY2Q9UBP5 337 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 UTS2RQ9UKP6 389 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 CCL27Q9Y4X3 112 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
CLCN3-210ENST00000515420 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 GTF3C1Q12789 2109 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 EML6Q6ZMW3 1958 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 EXPH5Q8NEV8 1989 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 SPTAN1Q13813 2472 aaKnown RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 DIDO1Q9BTC0 2240 aaKnown RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 A0A1B0GUH1 482 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 C2orf92A0A1B0GVN3 265 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 TM9SF1O15321 606 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 RGS14O43566 566 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 UNC5CO95185 931 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 LDLRP01130 860 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 BPGMP07738 259 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 FBXO45P0C2W1 286 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CT62P0C5K7 136 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 DDCP20711 480 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 S1PR1P21453 382 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 NT5EP21589 574 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 SERPINB3P29508 390 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 SSTR4P31391 388 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 TMED10P49755 219 aaKnown RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 PER3P56645 1201 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF791Q3KP31 576 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CLEC6AQ6EIG7 209 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 SCIMPQ6UWF3 145 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 LYPD8Q6UX82 237 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 RGS9BPQ6ZS82 235 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms