RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RPL21P46778 160 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 HSPA7P48741 367 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MAN2A2P49641 1150 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 HNRNPFP52597 415 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 HK2P52789 917 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 RAB10P61026 200 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 GNG11P61952 73 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 RNF4P78317 190 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 PMPCAQ10713 525 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CHIT1Q13231 466 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SLC10A1Q14973 349 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 FASTKD3Q14CZ7 662 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 MPEG1Q2M385 716 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 GXYLT1Q4G148 440 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CES4AQ5XG92 561 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MED27Q6P2C8 311 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 B3GNT6Q6ZMB0 384 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SPNS3Q6ZMD2 512 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 FAM47EQ6ZV65 393 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CYS1Q717R9 158 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 LRRC70Q7Z2Q7 622 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MAATS1Q7Z4T9 603 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CCDC71Q8IV32 467 aaPredicted RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 DND1Q8IYX4 353 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 FAM109AQ8N4B1 249 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SPATA6LQ8N4H0 392 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SLC15A4Q8N697 577 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 ACOT4Q8N9L9 421 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 PDPRQ8NCN5 879 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 OR10Q1Q8NGQ4 319 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 STAG3L4Q8TBR4 150 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SLC22A8Q8TCC7 542 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SLC2A12Q8TD20 617 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TANKQ92844 425 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SARAFQ96BY9 339 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CMTM7Q96FZ5 175 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 RBM18Q96H35 190 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 DGAT2Q96PD7 388 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CSF3RQ99062 836 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 GPR22Q99680 433 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 NAPGQ99747 312 aaPredicted RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 ZNF559Q9BR84 538 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TMEM79Q9BSE2 394 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MCMBPQ9BTE3 642 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 ASPNQ9BXN1 380 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MS4A8Q9BY19 250 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TTTY12Q9BZ98 90 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CD244Q9BZW8 370 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 LDAHQ9H6V9 325 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CAB39LQ9H9S4 337 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 LIN28AQ9H9Z2 209 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 IL1RL2Q9HB29 575 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SAYSD1Q9NPB0 183 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 DEPPQ9NTK1 212 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 NUDT4Q9NZJ9 180 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 WHRNQ9P202 907 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 KCNN3Q9UGI6 736 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 DUSP13Q9UII6 198 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 PHF11Q9UIL8 331 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 PTBP2Q9UKA9 531 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 ACAD8Q9UKU7 415 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MTO1Q9Y2Z2 717 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 SNX24Q9Y343 169 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CLDN16Q9Y5I7 305 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 A0A1B0GVC2 190 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 CCDC189A1A4V9 331 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 FAM159BA6NKW6 160 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 K7EPI3 171 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 AQP7O14520 342 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 TP73O15350 636 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 PHGDHO43175 533 aaKnown RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 HCN1O60741 890 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 WDR1O75083 606 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 LDB3O75112 727 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 TOXO94900 526 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 GLSO94925 669 aaPredicted RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 WISP3O95389 354 aaPredicted RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 TBX6O95947 436 aaPredicted RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 IGHG3P01860 377 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 PCNAP12004 261 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 CD1EP15812 388 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 CD1DP15813 335 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 CPN2P22792 545 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 ATP5A1P25705 553 aaKnown RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 CRABP2P29373 138 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 BUD31P41223 144 aaPredicted RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 ZFP36L2P47974 494 aaKnown RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 RAP1GDS1P52306 607 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 ARFIP1P53367 373 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 NUP107P57740 925 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 KRTAP10-9P60411 292 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 PHEXP78562 749 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 PLIN5Q00G26 463 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 CAV1Q03135 178 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 MYBPHQ13203 477 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 OR4D1Q15615 310 aa6.63□□□□□ -1.35
USP46-208ENST00000512656 ZKSCAN8Q15776 578 aaPredicted RBP6.63□□□□□ -1.35
USP46-208ENST00000512656 HYAL4Q2M3T9 481 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms