RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SLC38A5Q8WUX1 472 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 IL1F10Q8WWZ1 152 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 THAP4Q8WY91 577 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 LRR1Q96L50 414 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 SIDT1Q9NXL6 827 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 GJD2Q9UKL4 321 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 SORCS3Q9UPU3 1222 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 LCHNA4D1U4 455 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CD300LBA8K4G0 201 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 H0Y8G0 127 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 PROCP04070 461 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 DBHP09172 617 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ASPAP45381 313 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 EDDM3BP56851 147 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 KANK2Q63ZY3 851 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 TDHQ8IZJ6 230 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 TBC1D20Q96BZ9 403 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ZNF583Q96ND8 569 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CPXM1Q96SM3 734 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CDCP1Q9H5V8 836 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 NOSIPQ9Y314 301 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 GCC2Q8IWJ2 1684 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 DHRS12A0PJE2 317 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 MTMR11A4FU01 709 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 UGT1A9O60656 530 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 OLFM2O95897 454 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 F10P00742 488 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CHRM4P08173 479 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ADH4P08319 380 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 PSKH1P11801 424 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 UGT1A4P22310 534 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ADRA1BP35368 520 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CSNK1A1P48729 337 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 RPS24P62847 133 aaKnown RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 CHRNA6Q15825 494 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CA9Q16790 459 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ZNF805Q5CZA5 627 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 NAPRTQ6XQN6 538 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ZNF584Q8IVC4 421 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 FAM185AQ8N0U4 392 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 GLB1L3Q8NCI6 653 aaPredicted RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 UBTD2Q8WUN7 234 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 PGM2Q96G03 612 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 GMLQ99445 158 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ATG5Q9H1Y0 275 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 OR10A5Q9H207 317 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 OR10A2Q9H208 303 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 SOX17Q9H6I2 414 aaPredicted RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 CALHM2Q9HA72 323 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 UGT1A7Q9HAW7 530 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 UGT1A10Q9HAW8 530 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 UGT1A8Q9HAW9 530 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 PPT2Q9UMR5 302 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CPT2P23786 658 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CD38P28907 300 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 TEX44Q53QW1 395 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 SMYD5Q6GMV2 418 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 GLYATQ6IB77 296 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 APOBEC3HQ6NTF7 200 aaKnown RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 CMTM2Q8TAZ6 248 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 UPRTQ96BW1 309 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 LHX6Q9UPM6 363 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CYP3A7-CYP3A51PA0A087WV96 503 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 F5H5K5 113 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 TRAPPC2LH3BP13 241 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 FOXE1O00358 373 aaPredicted RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 SCRG1O75711 98 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CHRM5P08912 532 aaPredicted RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 CYP3A7P24462 503 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 RPS14P62263 151 aaKnown RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 NHSL2Q5HYW2 709 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 FAM83HQ6ZRV2 1179 aaPredicted RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 PLPP6Q8IY26 295 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 INTS12Q96CB8 462 aaKnown RBP8.54□□□□□ -1.04
VCAN-208ENST00000512590 ADAM19Q9H013 955 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 MAN2C1Q9NTJ4 1040 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.54□□□□□ -1.04
VCAN-208ENST00000512590 ZCWPW2A0A1B0GU75 182 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 GLOD5A6NK44 160 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 MATN3O15232 486 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ARL6IP5O75915 188 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 EPXP11678 715 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 SFTPCP11686 197 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 PCMT1P22061 227 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 IL1R2P27930 398 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 TNFSF8P32971 234 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 SSX2Q16385 188 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 DEFB110Q30KQ9 67 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 AGAP7PQ5VUJ5 663 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 AGAP6Q5VW22 663 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 DCBLD1Q8N8Z6 715 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 ABHD11Q8NFV4 315 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 MALSU1Q96EH3 234 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 AGAP4Q96P64 663 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 SYT3Q9BQG1 590 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CRISPLD2Q9H0B8 497 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms