RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CRYGSP22914 178 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 CPOXP36551 454 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 MC3RP41968 323 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 HNMTP50135 292 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 RCAN2Q14206 197 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 TBCELQ5QJ74 424 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 FAM45BPQ6NSW5 357 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 TRMT10BQ6PF06 316 aaKnown RBP17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 RNF111Q6ZNA4 994 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 SLC29A4Q7RTT9 530 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 RNF175Q8N4F7 328 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 FAM45AQ8TCE6 357 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 CERS2Q96G23 380 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 TBCDQ9BTW9 1192 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 PITHD1Q9GZP4 211 aaPredicted RBP17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 PSAT1Q9Y617 370 aa17.29■□□□□ 0.36
HMGCS1-206ENST00000511774 CPN1P15169 458 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 ALOX15P16050 662 aaPredicted RBP17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 SSTR4P31391 388 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 MASP1P48740 699 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 HNRNPH2P55795 449 aaKnown RBP17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 PLIN5Q00G26 463 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 SRYQ05066 204 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 TNK1Q13470 666 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 SPRED3Q2MJR0 410 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 TIGD3Q6B0B8 471 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 PRR22Q8IZ63 422 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF473Q8WTR7 871 aaKnown RBP17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 UCN3Q969E3 161 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 WDR34Q96EX3 536 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 RBM18Q96H35 190 aaKnown RBP17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 EHD1Q9H4M9 534 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 RPF2Q9H7B2 306 aaKnown RBP17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 FETUBQ9UGM5 382 aa17.28■□□□□ 0.36
HMGCS1-206ENST00000511774 IQANK1A0A1B0GTG1 560 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 A0A1W2PNV4 684 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 C2orf72A6NCS6 295 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 SOX30O94993 753 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 SNX4O95219 450 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 SPANXN3Q5MJ09 141 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF474Q6S9Z5 364 aaPredicted RBP17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 C20orf204Q6ZNR8 217 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 ZNF550Q7Z398 422 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 PACS2Q86VP3 889 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 WNT2BQ93097 391 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 TMEM41AQ96HV5 264 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 ART5Q96L15 291 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 ZFP3Q96NJ6 502 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 UCN2Q96RP3 112 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 TM9SF2Q99805 663 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 PIGMQ9H3S5 423 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 DNAJC11Q9NVH1 559 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 GPRC5BQ9NZH0 403 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 PACSIN3Q9UKS6 424 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 DTX4Q9Y2E6 619 aa17.27■□□□□ 0.36
HMGCS1-206ENST00000511774 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.27■□□□□ 0.353e-8■■□□□ 12.6
HMGCS1-206ENST00000511774 TP53I11O14683 189 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 TGM6O95932 706 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 ACTL6AO96019 429 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 TGFB1P01137 390 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 HPDP32754 393 aaPredicted RBP17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 HSPA7P48741 367 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 STARP49675 285 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 TAS2R39P59534 338 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 TGM3Q08188 693 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 SLAMF1Q13291 335 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 RNASEH2BQ5TBB1 312 aaKnown RBP17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 VWA1Q6PCB0 445 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 ST13P4Q8IZP2 240 aaPredicted RBP17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 ANKRD7Q92527 254 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 CTHRC1Q96CG8 243 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 STARD4Q96DR4 205 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 PTCD3Q96EY7 689 aaKnown RBP17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 ROGDIQ9GZN7 287 aa17.26■□□□□ 0.35
HMGCS1-206ENST00000511774 A0A087X1B8 175 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 GLOD5A6NK44 160 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 H0Y3Z8 333 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 PAX1P15863 534 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 PTGDSP41222 190 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 SSR2P43308 183 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 TNFRSF17Q02223 184 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 TGFBIQ15582 683 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 AP5B1Q2VPB7 878 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 HP1BP3Q5SSJ5 553 aaPredicted RBP17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 ANGPTL8Q6UXH0 198 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 TAGAPQ8N103 731 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 SPATA6LQ8N4H0 392 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 SNX31Q8N9S9 440 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 ADIPOR1Q96A54 375 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 MAGOHBQ96A72 148 aaKnown RBP17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 OR51B5Q9H339 312 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 ZNF701Q9NV72 531 aaPredicted RBP17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.25■□□□□ 0.356e-6■□□□□ 8.2
HMGCS1-206ENST00000511774 WWOXQ9NZC7 414 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 CTNNAL1Q9UBT7 734 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 SPACA6W5XKT8 324 aa17.25■□□□□ 0.35
HMGCS1-206ENST00000511774 C2orf92A0A1B0GVN3 265 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms