RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TAF8Q7Z7C8 310 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC47A2Q86VL8 602 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CCDC71Q8IV32 467 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 C4orf32Q8N8J7 132 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR2L2Q8NH16 312 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR4F5Q8NH21 305 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 KIAA1524Q8TCG1 905 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 NSMCE2Q96MF7 247 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 DEFB118Q96PH6 123 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 PSMB7Q99436 277 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 SPXQ9BT56 116 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CCDC28BQ9BUN5 200 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 KCNN3Q9UGI6 736 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 DNPEPQ9ULA0 475 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 NUDCQ9Y266 331 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC6A5Q9Y345 797 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 STYXL1Q9Y6J8 313 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 FER1L5A0AVI2 2057 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 CACNA1FO60840 1977 aa2.76□□□□□ -1.97
TRAPPC11-207ENST00000511409 A0A0U1RRA0 63 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 BCLAF3A2AJT9 711 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 KRT87PA6NCN2 255 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 RPL37AP8A6NKH3 93 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 RNF212BA8MTL3 300 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 TXNL1O43396 289 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 TSPAN2O60636 221 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 GALR3O60755 368 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 LRP3O75074 770 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 IGHG1P01857 330 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 MT-ND1P03886 318 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 ALPPP05187 535 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 PGK2P07205 417 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 APRTP07741 180 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 GSTA1P08263 222 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 FCGR3AP08637 254 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 ALPPL2P10696 532 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMOD1P28289 359 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 SHC1P29353 583 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 PPP2R1BP30154 601 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 GSK3BP49841 420 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 CCL11P51671 97 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC7A2P52569 658 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 CNPY1Q3B7I2 92 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 C9orf66Q5T8R8 295 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 LEMD1Q68G75 181 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 ARMCX5Q6P1M9 558 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 MFSD7Q6UXD7 560 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMUB2Q71RG4 321 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 LUZP1Q86V48 1076 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 LMNTD2Q8IXW0 634 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 LRRC17Q8N6Y2 441 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 GPATCH11Q8N954 259 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 MLKLQ8NB16 471 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 ZNRF1Q8ND25 227 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 OR8H1Q8NGG4 311 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 PHYHIPQ92561 330 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 TOMM40LQ969M1 308 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 PNPLA2Q96AD5 504 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 RBM18Q96H35 190 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 COQ7Q99807 217 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 RAB11FIP5Q9BXF6 653 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 PUS3Q9BZE2 481 aaKnown RBP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 TRIM6Q9C030 488 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 SIRPDQ9H106 197 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 RNF41Q9H4P4 317 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 IL1RL2Q9HB29 575 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 CCPG1Q9ULG6 757 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 ODF2LQ9ULJ1 636 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 PCNX3Q9H6A9 2034 aa2.75□□□□□ -1.97
TRAPPC11-207ENST00000511409 GPRASP1Q5JY77 1395 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 RNF103-CHMP3A0A140T963 221 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 TMEM89A2RUT3 159 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 FRAT2O75474 233 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 MT-ATP6P00846 226 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 HOXD4P09016 255 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 KRT5P13647 590 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 ETS1P14921 441 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 FOSL2P15408 326 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 GAP43P17677 238 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 AKT2P31751 481 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 MATKP42679 507 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 NPY2RP49146 381 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 NDST1P52848 882 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 SLC8A3P57103 927 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 COX10Q12887 443 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 LPAL2Q16609 132 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 HKDC1Q2TB90 917 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 HERC4Q5GLZ8 1057 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 FAM182AQ5T1J6 154 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 LIPKQ5VXJ0 399 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 REP15Q6BDI9 236 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 FBXL22Q6P050 247 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 ABRAXAS1Q6UWZ7 409 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 APOOLQ6UXV4 268 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 C1orf186Q6ZWK4 172 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 MYPOPQ86VE0 399 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 LRRC49Q8IUZ0 686 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 PYROXD2Q8N2H3 581 aa2.74□□□□□ -1.97
TRAPPC11-207ENST00000511409 KDM8Q8N371 416 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms