RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CYB5R2Q6BCY4 276 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 HMBOX1Q6NT76 420 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 MRPL14Q6P1L8 145 aaKnown RBP2.65□□□□□ -1.99
CLOCK-209ENST00000511124 TUBA3EQ6PEY2 450 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 KIRREL2Q6UWL6 708 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 IGFL2Q6UWQ7 119 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CLEC17AQ6ZS10 378 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 LARP4Q71RC2 724 aaKnown RBP eCLIP2.65□□□□□ -1.99
CLOCK-209ENST00000511124 SLC46A3Q7Z3Q1 461 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 PRUNE1Q86TP1 453 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CRLF3Q8IUI8 442 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 ZZZ3Q8IYH5 903 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 C2orf73Q8N5S3 287 aaPredicted RBP2.65□□□□□ -1.99
CLOCK-209ENST00000511124 OR2M7Q8NG81 312 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 SLC26A7Q8TE54 656 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CCDC120Q96HB5 630 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 PDLIM5Q96HC4 596 aaKnown RBP2.65□□□□□ -1.99
CLOCK-209ENST00000511124 PPP3R2Q96LZ3 170 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 COG8Q96MW5 612 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF583Q96ND8 569 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CEP41Q9BYV8 373 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 C12orf65Q9H3J6 166 aaKnown RBP2.65□□□□□ -1.99
CLOCK-209ENST00000511124 MS4A5Q9H3V2 200 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 NPHS2Q9NP85 383 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 ACP6Q9NPH0 428 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 SLC52A3Q9NQ40 469 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 NKIRAS1Q9NYS0 192 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 MOCS1Q9NZB8 636 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CORO2BQ9UQ03 480 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 PDE10AQ9Y233 779 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 AP4B1Q9Y6B7 739 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CNTRLQ7Z7A1 2325 aa2.65□□□□□ -1.99
CLOCK-209ENST00000511124 CKAP5Q14008 2032 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 IGLV3-16A0A075B6K0 115 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 IGLV3-12A0A075B6K2 115 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A087WUV0 522 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A096LPI6 279 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF726A6NNF4 738 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 EVPLLA8MZ36 301 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 UBXN8O00124 270 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 GAPDHSO14556 408 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PDE9AO76083 593 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 VAMP5O95183 116 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 SNRPAP09012 282 aaKnown RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 GIMD1P0DJR0 217 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PRF1P14222 555 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PTAFRP25105 342 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 CHRNA4P43681 627 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MMP16P51512 607 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PRPS1P60891 318 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 RAB8AP61006 207 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 IRX1P78414 480 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 REEP5Q00765 189 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ZBTB17Q13105 803 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 BLMHQ13867 455 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 LARS2Q15031 903 aaKnown RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MLC1Q15049 377 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 DEFB113Q30KQ7 82 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 EIPR1Q53HC9 387 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 SH2D4BQ5SQS7 431 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PRAMEF17Q5VTA0 474 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ANKRD26P1Q6NSI1 321 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ZNF544Q6NX49 715 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 SPNS3Q6ZMD2 512 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 BNIPLQ7Z465 357 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 GLCCI1Q86VQ1 547 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ALDH16A1Q8IZ83 802 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 LRRC25Q8N386 305 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 COX18Q8N8Q8 333 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 SGMS2Q8NHU3 365 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 FAM76AQ8TAV0 307 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 RNF217Q8TC41 542 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PPCDCQ96CD2 204 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MBD6Q96DN6 1003 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 FBXL20Q96IG2 436 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 PLEKHA8Q96JA3 519 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 LCORQ96JN0 433 aaPredicted RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 LRRC37BQ96QE4 947 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 AGAP2Q99490 1192 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MLXIPLQ9NP71 852 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 TRIM36Q9NQ86 728 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ST6GALNAC2Q9UJ37 374 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 SLC12A4Q9UP95 1085 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 POFUT2Q9Y2G5 429 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 DTNAQ9Y4J8 743 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 RNF115Q9Y4L5 304 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 LIPGQ9Y5X9 500 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MRPS18BQ9Y676 258 aaKnown RBP2.64□□□□□ -1.99
CLOCK-209ENST00000511124 MYO16Q9Y6X6 1858 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 ABCA4P78363 2273 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 LY6G6EA0A0G2JKS1 128 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A1B0GTH9 108 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 hCG_1809904A0A1W2PP81 198 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A1W2PPE2 198 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A1W2PPH5 198 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A1W2PR64 198 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A0A1W2PRV1 198 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 CLCA1A8K7I4 914 aa2.64□□□□□ -1.99
CLOCK-209ENST00000511124 A8MV72 311 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms