RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 KLHL20Q9Y2M5 609 aa13.47□□□□□ -0.25
AP003555.1-202ENST00000511013 LSM2Q9Y333 95 aaKnown RBP13.47□□□□□ -0.25
AP003555.1-202ENST00000511013 PCDHGB6Q9Y5F9 930 aa13.47□□□□□ -0.25
AP003555.1-202ENST00000511013 FAM227AF5H4B4 570 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 LCMT2O60294 686 aaKnown RBP13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 PCDH8O95206 1070 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 APOA1P02647 267 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SERPIND1P05546 499 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 ALOX12P18054 663 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 IL12RB1P42701 662 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 ARFIP1P53367 373 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 CAMK1Q14012 370 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SLC9A5Q14940 896 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SSX1Q16384 188 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SYPL1Q16563 259 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SLC25A30Q5SVS4 291 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 NDUFAF5Q5TEU4 345 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 KIAA1211LQ6NV74 962 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SLC34A3Q8N130 599 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 OR4D11Q8NGI4 311 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 PHOSPHO2Q8TCD6 241 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 CREB3L4Q8TEY5 395 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 C12orf66Q96MD2 445 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 CCDC32Q9BV29 185 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 POLDIP3Q9BY77 421 aaKnown RBP13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 KLHL25Q9H0H3 589 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 GLIPR2Q9H4G4 154 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 SERHL2Q9H4I8 314 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 ZCCHC3Q9NUD5 404 aaKnown RBP13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 OBP2AQ9NY56 170 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 DNAJC27Q9NZQ0 273 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 A4GNTQ9UNA3 340 aa13.46□□□□□ -0.25
AP003555.1-202ENST00000511013 A0A0G2JPF8 293 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 OTOL1A6NHN0 477 aaPredicted RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 HNRNPCL3B7ZW38 293 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 C5orf67F2Z3F1 127 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 KCNJ13O60928 360 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 GPX5O75715 221 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SOX14O95416 240 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 DLGAP3O95886 979 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 HNRNPCL4P0DMR1 293 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 GSTM3P21266 225 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SEPHS1P49903 392 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 RAB28P51157 221 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 NCBP2P52298 156 aaKnown RBP eCLIP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TAS2R38P59533 333 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SLC13A2Q13183 592 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ZIC1Q15915 447 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 PODNL1Q6PEZ8 512 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SZRD1Q7Z422 152 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 CCDC190Q86UF4 302 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 RBM45Q8IUH3 476 aaKnown RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 NANOGP1Q8N7R0 232 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TCEANCQ8N8B7 351 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 LINC01555Q8NAE3 123 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 GALNT6Q8NCL4 622 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 OR2L8Q8NGY9 312 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SLC7A13Q8TCU3 470 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TSSK6Q9BXA6 273 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ASPNQ9BXN1 380 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 RSPO3Q9BXY4 272 aaPredicted RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 WDR26Q9H7D7 661 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 HHATLQ9HCP6 504 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 HCN2Q9UL51 889 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 WDR37Q9Y2I8 494 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SNX11Q9Y5W9 270 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 MAN2B1O00754 1011 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 CASC3O15234 703 aaKnown RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SEMA7AO75326 666 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ADRA2AP08913 450 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ACADMP11310 421 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TNNI3P19429 210 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 COPZ1P61923 177 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ABATP80404 500 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ZNF91Q05481 1191 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 KRT33BQ14525 404 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TMEM240Q5SV17 173 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 FAM83FQ8NEG4 500 aaPredicted RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 ST13P5Q8NFI4 369 aaPredicted RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 OR56A1Q8NGH5 318 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SUN3Q8TAQ9 357 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 HTRA1Q92743 480 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TXNDC15Q96J42 360 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 SLC30A2Q9BRI3 323 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 TIMM29Q9BSF4 260 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 CNPPD1Q9BV87 410 aa13.45□□□□□ -0.26
AP003555.1-202ENST00000511013 EXOSC4Q9NPD3 245 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms