RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PANK2Q9BZ23 570 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 MIS12Q9H081 205 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 ZDHHC6Q9H6R6 413 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 UPF2Q9HAU5 1272 aaKnown RBP5.74□□□□□ -1.49
USP53-206ENST00000510737 SEBOXQ9HB31 216 aaPredicted RBP5.74□□□□□ -1.49
USP53-206ENST00000510737 FGF21Q9NSA1 209 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 CISHQ9NSE2 258 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 BEX4Q9NWD9 120 aaPredicted RBP5.74□□□□□ -1.49
USP53-206ENST00000510737 VANGL2Q9ULK5 521 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 FARSAQ9Y285 508 aaKnown RBP5.74□□□□□ -1.49
USP53-206ENST00000510737 CSAG2Q9Y5P2 127 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 JMJD1CQ15652 2540 aa5.74□□□□□ -1.49
USP53-206ENST00000510737 A0A087X002 238 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 GOLGA6L10A0A0M3HER8 536 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 CLDN11O75508 207 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 PCCBP05166 539 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 UGT2B4P06133 528 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 PLEKP08567 350 aaPredicted RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 HOXC4P09017 264 aaPredicted RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 TRIM23P36406 574 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 PIK3CAP42336 1068 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 PAPOLAP51003 745 aaKnown RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 LUMP51884 338 aaPredicted RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 KCNK10P57789 538 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 SNRPFP62306 86 aaKnown RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 BST2Q10589 180 aaKnown RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 BIRC2Q13490 618 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 EFR3AQ14156 821 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 IL11RAQ14626 422 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 ALFQ53S48 1182 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 XKRXQ6PP77 449 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 STXBP4Q6ZWJ1 553 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 GTSCR1Q86UQ5 136 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 HAPLN4Q86UW8 402 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 CCDC65Q8IXS2 484 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 BEST3Q8N1M1 668 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 ATP6V0D2Q8N8Y2 350 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 FAM184AQ8NB25 1140 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 OR10G6Q8NH81 332 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 ORAI1Q96D31 301 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 ARHGEF26Q96DR7 871 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 EEF2KMTQ96G04 330 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 SLC41A2Q96JW4 573 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 LLPHQ9BRT6 129 aaKnown RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 TM6SF2Q9BZW4 377 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 DNAI2Q9GZS0 605 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 SUDS3Q9H7L9 328 aaPredicted RBP5.73□□□□□ -1.49
USP53-206ENST00000510737 DMAC2Q9NW81 257 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 LNPEPQ9UIQ6 1025 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 MOSPD1Q9UJG1 213 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 HSF4Q9ULV5 492 aa5.73□□□□□ -1.49
USP53-206ENST00000510737 CUBNO60494 3623 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 A0A0U1RQS6 177 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 O00370 1275 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 CCL21O00585 134 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 SYNGR3O43761 229 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 JRKO75564 520 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 EML2O95834 649 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 TRUB2O95900 331 aaKnown RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 MT-ND3P03897 115 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 RHOCP08134 193 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 FAM106CPP0CH98 169 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 PPM1FP49593 454 aaPredicted RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 SERPINH1P50454 418 aaKnown RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 TERF1P54274 439 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 CDH4P55283 916 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 KIAA1024LP59773 190 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 RPS15P62841 145 aaKnown RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 CSNK1G2P78368 415 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 ARF5P84085 180 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 NAE1Q13564 534 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 MYLK3Q32MK0 819 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 LCE3EQ5T5B0 92 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 LYPLAL1Q5VWZ2 237 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 BBS12Q6ZW61 710 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 TRPT1Q86TN4 253 aaKnown RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 RYBPQ8N488 228 aaPredicted RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 DCAF4L2Q8NA75 395 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 SLC38A5Q8WUX1 472 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 SEMA4DQ92854 862 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 ASCL2Q99929 193 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 TREX2Q9BQ50 279 aaPredicted RBP5.72□□□□□ -1.49
USP53-206ENST00000510737 SLX1AQ9BQ83 275 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 GSDMCQ9BYG8 508 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 ARHGEF38Q9NXL2 777 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 SLC12A6Q9UHW9 1150 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 LRP4O75096 1905 aa5.72□□□□□ -1.49
USP53-206ENST00000510737 TRGV8A0A0C4DH27 118 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 ZCWPW2A0A1B0GU75 182 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 CACNB4O00305 520 aaPredicted RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 CIDEAO60543 219 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 CTSVO60911 334 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 ADCY5O95622 1261 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 POP4O95707 220 aaKnown RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 ANKRD34CP0C6C1 535 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 FASLGP48023 281 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 GCLMP48507 274 aa5.71□□□□□ -1.5
USP53-206ENST00000510737 CLK1P49759 484 aaKnown RBP5.71□□□□□ -1.5
USP53-206ENST00000510737 VAMP7P51809 220 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms