RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RAB28P51157 221 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 BCAT1P54687 386 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SESN2P58004 480 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ERVS71-1P61550 626 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 NKX6-1P78426 367 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RIPPLY1Q0D2K3 151 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 GAGE1Q13065 139 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLAMF1Q13291 335 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC39A6Q13433 755 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 AQP6Q13520 282 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CSHL1Q14406 222 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 POU6F1Q14863 301 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC17A1Q14916 467 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PSG3Q16557 428 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ALKBH6Q3KRA9 238 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF789Q5FWF6 425 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PCID2Q5JVF3 399 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM63BQ5T3F8 832 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ARHGAP40Q5TG30 622 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MEDAGQ5VYS4 303 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SEL1L3Q68CR1 1132 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 BRAT1Q6PJG6 821 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM108Q6UXF1 575 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CCNI2Q6ZMN8 369 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ZBTB49Q6ZSB9 765 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 GDPD3Q7L5L3 318 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TFAP2DQ7Z6R9 452 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PAQR7Q86WK9 346 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM17Q86X19 198 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 DHFR2Q86XF0 187 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SFR1Q86XK3 245 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PHF13Q86YI8 300 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC35F3Q8IY50 421 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MICU2Q8IYU8 434 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ADGRF4Q8IZF3 695 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MMP21Q8N119 569 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FAM109AQ8N4B1 249 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 KIF2BQ8N4N8 673 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TERB1Q8NA31 727 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FAM83FQ8NEG4 500 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 OR5M8Q8NGP6 311 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TBC1D16Q8TBP0 767 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ACTRT1Q8TDG2 376 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MRGPRDQ8TDS7 321 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 NEK7Q8TDX7 302 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 AGAP11Q8TF27 550 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FAM172AQ8WUF8 416 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CASKIN2Q8WXE0 1202 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SMPDL3AQ92484 453 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 AP3S1Q92572 193 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MAP4K1Q92918 833 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FOXRED1Q96CU9 486 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 AP2M1Q96CW1 435 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 DGCR14Q96DF8 476 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 NXPE2Q96DL1 559 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SAT2Q96F10 170 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC35A4Q96G79 324 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FAM210BQ96KR6 192 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MRGPRX4Q96LA9 322 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC46A1Q96NT5 459 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 KLHDC3Q9BQ90 382 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM79Q9BSE2 394 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF2Q9BSG1 426 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MED10Q9BTT4 135 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 KIFC1Q9BW19 673 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ROGDIQ9GZN7 287 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 S1PR5Q9H228 398 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 UBQLN3Q9H347 655 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TP63Q9H3D4 680 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MAGEF1Q9HAY2 307 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 USP29Q9HBJ7 922 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PLGRKTQ9HBL7 147 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 LPAR2Q9HBW0 351 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF160Q9HCG1 818 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SEMA4BQ9NPR2 832 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 AKIP1Q9NQ31 210 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 IMP3Q9NV31 184 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SPG21Q9NZD8 308 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CD274Q9NZQ7 290 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC25A10Q9UBX3 287 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 DNAJC12Q9UKB3 198 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ACSL5Q9ULC5 683 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ST3GAL5Q9UNP4 418 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 EXOGQ9Y2C4 368 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 LRRC37A3O60309 1634 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 NCAPD2Q15021 1401 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ADGRL3Q9HAR2 1447 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SPATA31D1Q6ZQQ2 1576 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 DLG5Q8TDM6 1919 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ABCC4O15439 1325 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ALKQ9UM73 1620 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 A0A087WZ62 844 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 FAM237BA0A1B0GVD1 139 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 A0A1B0GVL5 298 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SMIM31A0A1B0GVY4 71 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ILVBLA1L0T0 632 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 WIPF3A6NGB9 483 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 FBLL1A6NHQ2 334 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms