RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 RPP38P78345 283 aaKnown RBP14.03□□□□□ -0.16
PHF3-209ENST00000509330 RPL6Q02878 288 aaKnown RBP14.03□□□□□ -0.16
PHF3-209ENST00000509330 EPS8Q12929 822 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 MEX3DQ86XN8 651 aaKnown RBP14.03□□□□□ -0.16
PHF3-209ENST00000509330 SRFBP1Q8NEF9 429 aaKnown RBP14.03□□□□□ -0.16
PHF3-209ENST00000509330 PROX1Q92786 737 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 ZG16BQ96DA0 208 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 ZFYVE21Q9BQ24 234 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 CCDC3Q9BQI4 270 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 ORAI3Q9BRQ5 295 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 CES1P1Q9UKY3 287 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 GMEB1Q9Y692 573 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 CFAP54Q96N23 3096 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 CABIN1Q9Y6J0 2220 aa14.03□□□□□ -0.16
PHF3-209ENST00000509330 TMEM247A6NEH6 219 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 SLC1A7O00341 560 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 ADAMDEC1O15204 470 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 GADD45GO95257 159 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 IFNA14P01570 189 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 HLCSP50747 726 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 NPRL3Q12980 569 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 CDK5R2Q13319 367 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 SMAD2Q15796 467 aaKnown RBP14.02□□□□□ -0.16
PHF3-209ENST00000509330 LEXMQ3ZCV2 418 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 TMEM236Q5W0B7 351 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 FAM111BQ6SJ93 734 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 FAM92BQ6ZTR7 304 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 AVL9Q8NBF6 648 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 KLHL6Q8WZ60 621 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 HLA-CQ95604 372 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 RDH12Q96NR8 316 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 GIMAP4Q9NUV9 329 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 POT1Q9NUX5 634 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 P2RX2Q9UBL9 471 aa14.02□□□□□ -0.16
PHF3-209ENST00000509330 RSL24D1Q9UHA3 163 aaKnown RBP14.02□□□□□ -0.16
PHF3-209ENST00000509330 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 FFAR1O14842 300 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 CDC123O75794 336 aaPredicted RBP14.02□□□□□ -0.17
PHF3-209ENST00000509330 MFN2O95140 757 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 CHRM4P08173 479 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 XKP51811 444 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 TRA2BP62995 288 aaKnown RBP14.02□□□□□ -0.17
PHF3-209ENST00000509330 UBE2IP63279 158 aaKnown RBP14.02□□□□□ -0.17
PHF3-209ENST00000509330 TUBA4AP68366 448 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.17
PHF3-209ENST00000509330 SHC2P98077 582 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 FUT5Q11128 374 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 DEFB133Q30KQ1 61 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 CCDC81Q6ZN84 652 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 C11orf74Q86VG3 221 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 METTL27Q8N6F8 245 aaPredicted RBP14.02□□□□□ -0.17
PHF3-209ENST00000509330 TMEM52Q8NDY8 209 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 NUP43Q8NFH3 380 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 SLC9A6Q92581 669 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 TBC1D20Q96BZ9 403 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 ARSGQ96EG1 525 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 PRO3102Q9H379 93 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 CXorf21Q9HAI6 301 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 SLC2A4RGQ9NR83 387 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 SLC6A14Q9UN76 642 aa14.02□□□□□ -0.17
PHF3-209ENST00000509330 WBP11Q9Y2W2 641 aaKnown RBP14.02□□□□□ -0.17
PHF3-209ENST00000509330 TRBV4-1A0A0J9YWV2 114 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 OR2W5A6NFC9 320 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 SGK494L7N484 410 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 GUCY1B2O75343 617 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 HTR1AP08908 422 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 CDH3P22223 829 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 MPIP34949 423 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 CCR5P51681 352 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 HOXC5Q00444 222 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 TGM3Q08188 693 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 PIN1Q13526 163 aaPredicted RBP14.01□□□□□ -0.17
PHF3-209ENST00000509330 SUZ12Q15022 739 aaKnown RBP14.01□□□□□ -0.17
PHF3-209ENST00000509330 CCDC80Q76M96 950 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 HSPA12BQ96MM6 686 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 EPYCQ99645 322 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 PIP5K1AQ99755 562 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 GABARAPL1Q9H0R8 117 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 A4GALTQ9NPC4 353 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 IRAK4Q9NWZ3 460 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 EHD3Q9NZN3 535 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 NAALAD2Q9Y3Q0 740 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 CASC3O15234 703 aaKnown RBP14.01□□□□□ -0.17
PHF3-209ENST00000509330 TBX19O60806 448 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 JRKO75564 520 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 DCNP07585 359 aaKnown RBP14.01□□□□□ -0.17
PHF3-209ENST00000509330 ARMC6Q6NXE6 501 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 B3GNT8Q7Z7M8 397 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 SARGQ9BW04 601 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 SEMA3GQ9NS98 782 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 ACER3Q9NUN7 267 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 TAS2R7Q9NYW3 318 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 NDUFA13Q9P0J0 144 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 B3GALT2O43825 422 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 SOX14O95416 240 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 NTN1O95631 604 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 IGFBP1P08833 259 aaPredicted RBP14.01□□□□□ -0.17
PHF3-209ENST00000509330 CD247P20963 164 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 XCR1P46094 333 aa14.01□□□□□ -0.17
PHF3-209ENST00000509330 RFX3P48380 749 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms