RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PHPT1Q9NRX4 125 aaPredicted RBP7□□□□□ -1.29
UBE2D3-224ENST00000508474 RNF181Q9P0P0 153 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 LAMP5Q9UJQ1 280 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 PTGDR2Q9Y5Y4 395 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 TMEM14AQ9Y6G1 99 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 KIF1AQ12756 1690 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 TRBV2A0A0J9YWF9 115 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 MYBPHLA2RUH7 354 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 FAM155AB1AL88 458 aaPredicted RBP7□□□□□ -1.29
UBE2D3-224ENST00000508474 PSMD9O00233 223 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 PEX14O75381 377 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 IFNA5P01569 189 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 NDUFV2P19404 249 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 TIA1P31483 386 aaKnown RBP eCLIP7□□□□□ -1.294e-8■■■□□ 15.6
UBE2D3-224ENST00000508474 PCGF2P35227 344 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 SOX9P48436 509 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 STK11Q15831 433 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 LRIT3Q3SXY7 679 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 PLEKHS1Q5SXH7 462 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
UBE2D3-224ENST00000508474 DGLUCYQ7Z3D6 616 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 RASGEF1AQ8N9B8 481 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 SCGB1C1Q8TD33 95 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 ELP5Q8TE02 316 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 SCARB1Q8WTV0 552 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 NSMAFQ92636 917 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 IMP4Q96G21 291 aaKnown RBP7□□□□□ -1.29
UBE2D3-224ENST00000508474 GJD4Q96KN9 370 aaPredicted RBP7□□□□□ -1.29
UBE2D3-224ENST00000508474 VRK1Q99986 396 aaPredicted RBP7□□□□□ -1.29
UBE2D3-224ENST00000508474 HOXD1Q9GZZ0 328 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 WDR26Q9H7D7 661 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 ERVMER34-1Q9H9K5 563 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 TMEM248Q9NWD8 314 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 SAGE1Q9NXZ1 904 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 OR6C2Q9NZP2 312 aa7□□□□□ -1.29
UBE2D3-224ENST00000508474 CACNB4O00305 520 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SDC3O75056 442 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 JUNP05412 331 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SFTPBP07988 381 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 MPC1LP0DKB6 136 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 TFPIP10646 304 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 RPL10P27635 214 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SOX3P41225 446 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ALDH3B1P43353 468 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 PTH2RP49190 550 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 RPS13P62277 151 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 CXCL9Q07325 125 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC10A2Q12908 348 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 DYRK1AQ13627 763 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ELOAQ14241 798 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 MS4A13Q5J8X5 152 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 TMPRSS12Q86WS5 348 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 WDTC1Q8N5D0 677 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SUN3Q8TAQ9 357 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 BRIX1Q8TDN6 353 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC16A10Q8TF71 515 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 C2orf15Q8WU43 125 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 LPPQ93052 612 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 HS6ST2Q96MM7 605 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 GLIS2Q9BZE0 524 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 KATNBL1Q9H079 304 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 UTS2RQ9UKP6 389 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 LIPT1Q9Y234 373 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 GPR45Q9Y5Y3 372 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 DCCP43146 1447 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 EEF1E1-BLOC1S5C9J1V9 151 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 RFXAPO00287 272 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SAP18O00422 153 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SYN3O14994 580 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 TREHO43280 583 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 HPGDSO60760 199 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF780AO75290 641 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 GNRH1P01148 92 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 FHP07954 510 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ERCC1P07992 297 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ATP1B2P14415 290 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 JUPP14923 745 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 GIFP27352 417 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ASAH1Q13510 395 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 PCBP2Q15366 365 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC35G1Q2M3R5 365 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 CDNFQ49AH0 187 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 FLYWCH1Q4VC44 716 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 C1orf220Q5T0J3 134 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ENPP7Q6UWV6 458 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 LINGO4Q6UY18 593 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 DNAJC5GQ8N7S2 189 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 THAP4Q8WY91 577 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ST8SIA4Q92187 359 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 DPF3Q92784 378 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 CLIP3Q96DZ5 547 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 MRGPRX2Q96LB1 330 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF300Q96RE9 604 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 NMNAT1Q9HAN9 279 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 NOX3Q9HBY0 568 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 CPA4Q9UI42 421 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 FCF1Q9Y324 198 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 EIF3FO00303 357 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-224ENST00000508474 PHYHO14832 338 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms